Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_002167.1 Length=39732 Score E Sequences producing significant alignments: (Bits) Value seq403192 735 0.0 seq375765 691 0.0 seq409642 587 2e-163 seq237293 470 4e-128 seq404959 131 4e-26 >seq403192 Length=430 Score = 735 bits (814), Expect = 0.0 Identities = 421/430 (98%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 28597 AGCTCAGGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 28656 |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 60 Query 28657 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 28716 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 120 Query 28717 GGGCTAAATTCTTCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCA 28776 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 121 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCA 180 Query 28777 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTG 28836 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 181 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 240 Query 28837 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTA 28896 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 241 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTA 300 Query 28897 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGT 28956 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 301 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGT 360 Query 28957 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 29016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 420 Query 29017 AGCGGTGATA 29026 ||||||||| Sbjct 421 GGCGGTGATA 430 >seq375765 Length=403 Score = 691 bits (766), Expect = 0.0 Identities = 395/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 36322 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 36381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 36382 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGACTTCGCCGG 36441 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 36442 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTCATCGGCTACATCGGTACTGACTC 36501 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 36502 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 36561 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 36562 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCGTGGTCAGAGGGAACTGATAACG 36621 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 36622 GACGGCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTCACTG 36681 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 36682 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 36724 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq409642 Length=345 Score = 587 bits (650), Expect = 2e-163 Identities = 337/345 (98%), Gaps = 0/345 (0%) Strand=Plus/Plus Query 22139 CGTAGCGATCAAGCCATGAATGTAACGTAACAGAATTATCACTGTTGATTCTTGCTGTCA 22198 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1 CGTAGCGATCAAGCCATGAATGTAACGTAACGGAATTATCACTGTTGATTCTCGCTGTCA 60 Query 22199 GAGGCTTGTGTTTGTGTCCTGAAAATAACTCAATGTTGGCCTGTATAGCTTCAGTGATTG 22258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAGGCTTGTGTTTGTGTCCTGAAAATAACTCAATGTTGGCCTGTATAGCTTCAGTGATTG 120 Query 22259 CTATCCTCCTGTCTCGGCCTAATCCGAACTCTTTACCCGTCCTTGGGTCCCTGTAGCAGT 22318 | || | |||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct 121 CGATTCGCCTGTCTCTGCCTAATCCAAACTCTTTACCCGTCCTTGGGTCCCTGTAGCAGT 180 Query 22319 AATATCCATTGTTTCTTATATAAAGGTTAGGGGGTAAATCCCGGCGCTCATGACTTCGCC 22378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 AATATCCATTGTTTCTTATATAAAGGTTAGGGGGTAAATCCCGGCGCTCATGACTTCGCC 240 Query 22379 TTCTTCCCATTTCTGATCCTCTTCAAAAGGCTACCTGTTACTGGTCGATTTAAGTCAACC 22438 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 241 TTCTTCCCATTTCTGATCCTCTTCAAAAGGCCACCTGTTACTGGTCGATTTAAGTCAACC 300 Query 22439 TTTACCGCTGATTCGTGGAACAGATACTCTCTTCCATCCTTAACC 22483 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTTACCGCTGATTCGTGGAACAGATACTCTCTTCCATCCTTAACC 345 >seq237293 Length=409 Score = 470 bits (520), Expect = 4e-128 Identities = 277/288 (96%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 32325 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 32384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 229 Query 32385 GCTATTCACGCGGTACAGCAAATTCTTCCAGACACAACCAAACCAATCGTAGTAACCATT 32444 ||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 228 GCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATT 169 Query 32445 CAGGAACGCAACCGCAGCTTAGACCAAAACCGAAAGCTTTGGGCTTGCCTTGGTGACGTC 32504 |||||||||||||||||||||||||||||||| ||||| ||||| | | | |||| |||| Sbjct 168 CAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTGGCGTC 109 Query 32505 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 32564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 49 Query 32565 ACCGCAGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 32612 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 48 ACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq404959 Length=455 Score = 131 bits (144), Expect = 4e-26 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 20946 CCGCAGCCACGTCGTATGCAAGAACGTGCTGCGGTTGGCTGGTGAACTTTCGATAGTGCG 21005 |||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||| Sbjct 380 CCGCAGACACGTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCG 321 Query 21006 AGTATTGAATGATTTCCAGCCGTTACCGATTTTAC 21040 || ||||||||||||||| | |||||||||||| Sbjct 320 GGTGTTGAATGATTTCCAGTTGCTACCGATTTTAC 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126258440132132