Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq406345 98.7 1e-15 seq105074 98.7 1e-15 seq278792 95.1 1e-14 seq486672 87.8 2e-12 seq385737 82.4 9e-11 seq166321 82.4 9e-11 seq11804 82.4 9e-11 >seq406345 Length=288 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 60 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 61 TACTAACGAGGA 72 >seq105074 Length=33720 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 29089 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 29148 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 29149 TACTAACGAGGA 29160 >seq278792 Length=7780 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3478 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3419 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 3418 TACTAACGAGGA 3407 >seq486672 Length=2918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 || || || | |||||||| |||| ||||| ||||||||||||||| |||||||||||| Sbjct 2691 TCGCCCCGTCGGGGAATCGGACCCCGGTCTGCCGCGTGACAGGCGGGGATACTCACCACT 2632 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 2631 ATACTAACGAGGA 2619 >seq385737 Length=159 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 60068 CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 60127 || |||| |||| |||||||| || | |||||||||||||||| ||||||||||||| | Sbjct 71 CCCCGGCGGGGACTCGAACCCCGGGCGCCCGCGTGACAGGCGGGGATACTCACCACTAGA 12 Query 60128 CTACCGAGGA 60137 ||| |||||| Sbjct 11 CTAACGAGGA 2 >seq166321 Length=11431 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 42990 CTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCG 43049 ||| | |||||||||||||| |||| ||| || || | || ||||||||||||||||| Sbjct 10504 CTCACTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCA 10563 Query 43050 AATATGAGTCGCTGCTGGTC 43069 || || ||||||||||| || Sbjct 10564 AAAATCAGTCGCTGCTGATC 10583 >seq11804 Length=1318 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 60068 CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 60127 || |||| ||||||||||||| ||||||||| ||| ||||||| |||||| ||||||| Sbjct 916 CCCCGGCGGGGAATCGAACCCCGGTCTCCCGGGTGGCAGGCGGGGATACTCGCCACTATG 857 Query 60128 CTACCGAGGA 60137 ||| |||||| Sbjct 856 CTAACGAGGA 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568205006505320