Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq109713 123 2e-23 seq50110 98.7 9e-16 >seq109713 Length=16520 Score = 123 bits (136), Expect = 2e-23 Identities = 109/135 (81%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| || ||||| |||||||| || | ||| ||||| ||||||| ||| || Sbjct 3686 TCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 3627 Query 11714 ATCCAAAATA-TAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGC 11772 | |||||| | | | ||||| || ||||||||||| ||||| ||||| |||||||| || Sbjct 3626 AGCCAAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGC 3567 Query 11773 TACTACTCTTTCTCC 11787 |||||| | |||||| Sbjct 3566 TACTACGCGTTCTCC 3552 >seq50110 Length=15533 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || || ||||| || || || | || ||||||| |||| || || Sbjct 3965 TCATCTCTGCTAATAAGCTCATTGGAGAAAGTCAGCCCAGGCATCAGGCCTCTCTTCTTC 4024 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | |||||||||||||||||| ||||| |||||||| || || || || || ||||| || Sbjct 4025 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAGCA 4084 Query 11774 ACTACTCTTTCTCC 11787 || ||||| || || Sbjct 4085 ACCACTCTCTCACC 4098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 465564783301360