Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq191736 96.9 3e-15 seq394259 82.4 8e-11 >seq191736 Length=12127 Score = 96.9 bits (106), Expect = 3e-15 Identities = 98/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 153684 ACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTT-TGATTGCTTTT 153742 |||||||| | ||||| |||||||||||| || | || ||| | || |||||||| || Sbjct 1974 ACTATTTCTGTACACAGATTGCTGCATTTGATG-GTCCCCAAGTTCTGCTGATTGCTCTT 2032 Query 153743 GCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCTAT 153802 ||||| |||| ||| ||||| |||||||| ||||||||||| || | ||| ||| || Sbjct 2033 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCTGTCTGAGATTCGAT 2092 Query 153803 AATAG 153807 |||| Sbjct 2093 GATAG 2097 >seq394259 Length=215 Score = 82.4 bits (90), Expect = 8e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || ||||| ||||||| | ||||||||||| || |||||||| ||| Sbjct 4 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 63 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| || || | | || | ||||| ||||||| || || | ||| | Sbjct 64 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATG 123 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| |||| || || || || || ||||| Sbjct 124 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492929997864800