Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq109713 123 4e-23 seq50110 120 4e-22 seq191736 100 4e-16 seq45188 93.3 6e-14 >seq109713 Length=16520 Score = 123 bits (136), Expect = 4e-23 Identities = 103/125 (82%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| |||||||| || |||||||| ||||| |||||||| ||||||| || | || | Sbjct 3688 CCTCATCTCTACTGATGAGTTCGTTAGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 3629 Query 50042 TAAGCCAAAATA-TGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 | |||||||| | | || ||||| || |||||||||||||||||||| ||||| |||||| Sbjct 3628 TCAGCCAAAAAAATTGATGCAAAAGAGCCAGAAAAGAAGATTCCTTCCACTGCTGCAAAG 3569 Query 50101 GCAAC 50105 || || Sbjct 3568 GCTAC 3564 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 49654 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 49713 ||||| |||||||| | || |||||||| ||||| || || || ||||| || || ||| Sbjct 4997 GACATGACTCCCATCCTCTGATATTCACCTACACGCTTCTCAAAGAAATTGGTCTTGCCT 4938 Query 49714 TCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 |||| || || ||||||||||| ||||| ||||| Sbjct 4937 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 4903 >seq50110 Length=15533 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| || || ||||| || || || || ||||| ||||| | ||| | Sbjct 3963 CCTCATCTCTGCTAATAAGCTCATTGGAGAAAGTCAGCCCAGGCATCAGGCCTCTCTTCT 4022 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||||||||| | ||||| || || ||||||||||| ||||| ||||| ||||| | Sbjct 4023 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAAG 4082 Query 50102 CAACAAGTCTCTCTCC 50117 |||| | |||||| || Sbjct 4083 CAACCACTCTCTCACC 4098 >seq191736 Length=12127 Score = 100 bits (110), Expect = 4e-16 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||| ||||| ||||||||||||||||| || || | || || ||||||| || ||| Sbjct 3302 ACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGC 3361 Query 79999 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 80057 || || ||||| || ||||| |||||| || || ||| | | || || ||||||| || Sbjct 3362 TCTTCTTTTCCAGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATGTCCAAATGCCATGG 3420 Query 80058 TTCCAAGTATATGGCCATAACTCCCGGTC 80086 |||| ||| ||||| | | | || |||| Sbjct 3421 CTCCAGGTAGATGGCAAAAGCCCCAGGTC 3449 >seq45188 Length=12499 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| ||||| ||||| || | ||||| || ||||| || |||||||| || || || | Sbjct 10465 TACCTGAAACTCTCCTGAGAGGACTCTGCGTGTGTAGATGTTACTGGTGTAGGGCTCGAT 10524 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||||||||| ||||| || |||||||| || || |||||||| || | | | | Sbjct 10525 GGATTCATTATTGCCCAAGATCTGAGCAGTAGAAGCAGTTGGCATGGGAGAAAGGAGAAG 10584 Query 79179 ACTATTTCTAAGACCGTAT 79197 || ||||| | ||||||| Sbjct 10585 GCTGTTTCTGACACCGTAT 10603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 713730966267160