Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_004913.3 Length=59866 Score E Sequences producing significant alignments: (Bits) Value seq354460 738 0.0 seq237293 132 2e-26 seq243231 87.8 7e-13 >seq354460 Length=442 Score = 738 bits (818), Expect = 0.0 Identities = 429/442 (97%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 37925 CCTGGGCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 37984 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 37985 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGG 38044 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 38045 GAGAGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAATAACATTCA 38104 ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 38105 CGCCGGAAGTGAACTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 38164 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 38165 GTGCTTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCGGCAAGCAGGGTGTGGA 38224 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 38225 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGT 38284 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 38285 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTT 38344 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 38345 CGACAGCTCTCACGTCGATTCC 38366 ||||||||||||| ||||| || Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 132 bits (146), Expect = 2e-26 Identities = 75/76 (99%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 46976 ATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 47035 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 47036 TGGGGGAGAGGGAAGT 47051 |||||||||||||||| Sbjct 293 TGGGGGAGAGGGAAGT 278 >seq243231 Length=365 Score = 87.8 bits (96), Expect = 7e-13 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 50284 ACGGTCAGAAAATACACTGGCGATAAAGAAGGAAAAAGACACGCTATTGTCAACGGTGTT 50343 ||||||||||||||| || |||||||| || |||| ||||| || ||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 50344 CTTATGGTTCATCGCGGATGG-GGTAAAGA 50372 || || ||||||||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190300548098584