Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_006949.1 Length=46900 Score E Sequences producing significant alignments: (Bits) Value seq237293 565 7e-157 seq375765 325 1e-84 >seq237293 Length=409 Score = 565 bits (626), Expect = 7e-157 Identities = 337/353 (95%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 40769 ATGACTATCTACATCACTGAGCTTGTAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 40828 ||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 40829 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 40888 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 293 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 234 Query 40889 AAAATGCCATTCACGCAGTACAGCAAATCCATCCAGACCCAACCAAACCAATCGTAGTAA 40948 |||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 233 AAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAA 174 Query 40949 CTATTCAGGAGCGCAACCGCAGCTTAGACCAAAATCGGAAGCTTTGGGCCTGCTTAGGTG 41008 | |||||||| ||||||||||||||||||||||| |||||||| ||||||| |||||||| Sbjct 173 CCATTCAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTG 114 Query 41009 ACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGCG 41068 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 113 GCGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTG 54 Query 41069 TGTTTACCGCAGCCTTAAAGCAGCAGGATGTTGTCCCTAACCTTGCCGGGAAT 41121 ||||||||||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 53 TGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq375765 Length=403 Score = 325 bits (360), Expect = 1e-84 Identities = 212/233 (91%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 44443 GTTTGCAATGGCGTACCTTCGCGGTCGGTATAATGGCGGTGCGTTTAAGAAAACACTAAT 44502 |||||||||||||||||||||||| | ||||||||||||||||||| |||||| |||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 44503 AGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTTTAGTCTTCGCCGG 44562 |||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 44563 ACTGAGTAGCAATCTTGCTTACATAGCGAGTGTGTTTATCGGCTACATCGGCACAGACTC 44622 ||| ||||||||||| ||||| ||| |||| |||||||||||||||||||| || ||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 44623 GATTGGTTCGCTAATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTCGATGATG 44675 |||||||||||| |||||||||||||||||||||||||||||||| || |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATG 171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149058372083236