Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq121029 96.9 9e-15 seq50110 87.8 5e-12 >seq121029 Length=35959 Score = 96.9 bits (106), Expect = 9e-15 Identities = 123/167 (74%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | ||||| ||| || |||||||||| ||||| ||||| Sbjct 20826 TACAAATGCCAAAGAGCTCTCTGCAAAGGGTGTGAAGATTTGGGATGCTAATGGGTCACG 20885 Query 111449 TGACTTTCTAGATTCAGTTGGTCTTGTCGACAAC-GAAGAAGGTGATCTCGGACCAGTTT 111507 ||| || || ||| || || || ||| | || || || ||| | |||||||||| Sbjct 20886 TGAGTTCCTGGATA-AGCAGGGTTTCAGGACCAGAGAGGAGGGGGATTTGGGACCAGTTT 20944 Query 111508 ACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 | || ||||| ||| | |||||||| ||||| |||||| |||||| Sbjct 20945 ATGGTTTTCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 20991 >seq50110 Length=15533 Score = 87.8 bits (96), Expect = 5e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 |||| ||||||| ||||||||||| |||||||| || | ||| ||| || ||||||| Sbjct 4085 TTGCTTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTTGGC 4026 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 | || || | | | ||||| || || || || || |||||| | |||||| |||||| Sbjct 4025 TGAAGAAGAGAGGCCTGATGCCTGGGCTGACTTTCTCCAATGAGCTTATTAGCAGAGATG 3966 Query 22619 AGG 22621 ||| Sbjct 3965 AGG 3963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1294913497937658