Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq265247 127 1e-24 seq190271 127 1e-24 seq1078 127 1e-24 seq322096 125 5e-24 seq282730 118 7e-22 seq488689 107 1e-18 seq379768 107 1e-18 seq255298 107 1e-18 seq253136 107 1e-18 seq243346 107 1e-18 seq208642 107 1e-18 seq134030 107 1e-18 seq73719 107 1e-18 seq4807 107 1e-18 seq789 107 1e-18 seq321627 100 2e-16 seq71883 98.7 7e-16 seq218380 95.1 8e-15 seq8447 95.1 8e-15 seq16933 93.3 3e-14 seq145297 89.7 3e-13 seq156453 87.8 1e-12 seq345753 86.0 4e-12 seq273797 84.2 1e-11 seq162934 84.2 1e-11 >seq265247 Length=386 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 220 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 279 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 280 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 314 >seq190271 Length=406 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 102 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 43 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 42 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 8 >seq1078 Length=2020 Score = 127 bits (140), Expect = 1e-24 Identities = 85/95 (89%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || |||||||| Sbjct 643 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 584 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 583 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 549 >seq322096 Length=518 Score = 125 bits (138), Expect = 5e-24 Identities = 85/96 (89%), Gaps = 6/96 (6%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG------GGTAATCTCG 25955 ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct 120 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTTGGGAATCTCG 61 Query 25956 TTAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 || |||| |||||||||||||||||||||||||||| Sbjct 60 TTCATCCATTCATGCGCGTCACTAATTAGATGACGA 25 >seq282730 Length=2946 Score = 118 bits (130), Expect = 7e-22 Identities = 83/95 (87%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||| ||||||||||||||||| ||| |||||||| ||||| || |||||||| Sbjct 2675 AAGCCCGGTCCCTTGGCTGTGGTTTGGCTGGATAGTAGGTAGGGACAGTGGGAATCTCGT 2616 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 2615 TCATCCATTCATGCGCGTCACTAATTAGATGACGA 2581 >seq488689 Length=439 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 57 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 116 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 117 GCCGGTATTTAGCCTTA 133 >seq379768 Length=355 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 186 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 245 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 246 GCCGGTATTTAGCCTTA 262 >seq255298 Length=566 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 562 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 503 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 502 GCCGGTATTTAGCCTTA 486 >seq253136 Length=427 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 423 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 364 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 363 GCCGGTATTTAGCCTTA 347 >seq243346 Length=318 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 48 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 107 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 108 GCCGGTATTTAGCCTTA 124 >seq208642 Length=384 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 88 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 29 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 28 GCCGGTATTTAGCCTTA 12 >seq134030 Length=461 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 121 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 62 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 61 GCCGGTATTTAGCCTTA 45 >seq73719 Length=301 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 109 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 50 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 49 GCCGGTATTTAGCCTTA 33 >seq4807 Length=605 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 97 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 38 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 37 GCCGGTATTTAGCCTTA 21 >seq789 Length=3091 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 635 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 694 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||||| Sbjct 695 GCCGGTATTTAGCCTTA 711 >seq321627 Length=2278 Score = 100 bits (110), Expect = 2e-16 Identities = 78/93 (84%), Gaps = 5/93 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956 ||||| |||||||||||||||||||| || ||||||| |||||| | |||||| | Sbjct 1504 AAGCCTGTTCCCTTGGCTGTGGTTTCACTGGATAGTACGTAGGGGCAGTAGGAATCTCAT 1445 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 | |||||||||||| | |||||||||||||||| Sbjct 1444 TCATCCTTTCATGCACATCACTAATTAGATGAC 1412 >seq71883 Length=379 Score = 98.7 bits (108), Expect = 7e-16 Identities = 57/59 (97%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 65 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCG 7 >seq218380 Length=156 Score = 95.1 bits (104), Expect = 8e-15 Identities = 78/95 (82%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||| ||||||||||||||||||||||||| |||||||| | ||| || ||| |||| Sbjct 13 AAGACCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTGGGGACAGTGGGAATATCGT 72 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | | || |||||| |||||| ||||| |||||||| Sbjct 73 TCAGCCATTCATGGGCGTCATTAATTTGATGACGA 107 >seq8447 Length=619 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||| | |||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 53 CTCCCCCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCGT 112 Query 20007 GGTAATATTTAGCCTTA 20023 | ||||| |||||| Sbjct 113 GCCGGTATTTCGCCTTA 129 >seq16933 Length=4604 Score = 93.3 bits (102), Expect = 3e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 |||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 60 CTCTCTCTTCAAGGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCGGTCTCG 2 >seq145297 Length=232 Score = 89.7 bits (98), Expect = 3e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||| Sbjct 161 CTCTCTCTTCAAAGTTCTTTTCAGCTTTCCCTTGCGGTACTTGTTGGCTATCGGTCTCGT 220 Query 20007 GGTAATATTTAG 20018 | ||||||| Sbjct 221 GCCGGTATTTAG 232 >seq156453 Length=356 Score = 87.8 bits (96), Expect = 1e-12 Identities = 51/53 (96%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCG 19999 |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 53 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTACTTGTTGGCTATCG 1 >seq345753 Length=1140 Score = 86.0 bits (94), Expect = 4e-12 Identities = 74/93 (80%), Gaps = 13/93 (14%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||| |||||||| ||||| || ||||||| Sbjct 538 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGGACAGTGGGAATCTCG- 480 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 ||||||| | || ||||||||||||| Sbjct 479 -------TTCATGCACATCGCTAATTAGATGAC 454 >seq273797 Length=500 Score = 84.2 bits (92), Expect = 1e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||| ||| |||| |||||||||||||| |||||||||||| | ||||||||| | Sbjct 109 CTCTCTCTGCAAGGTTCGTTTCAACTTTCCCTTACGGTACTTGTTGGGTATCGGTCTGGG 50 Query 20007 GGTAATATTTAGCCTT 20022 | ||||||||||| Sbjct 49 GCCGGTATTTAGCCTT 34 >seq162934 Length=167 Score = 84.2 bits (92), Expect = 1e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005 ||||||||| |||||||||||||||||||||| ||||||||||| | ||||||||||| Sbjct 65 CTCTCTCTTGAAAGTTCTTTTCAACTTTCCCTTGCGGTACTTGTTGGGTATCGGTCTCG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 332883994226189