Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_008464.1 Length=60238 Score E Sequences producing significant alignments: (Bits) Value seq354460 690 0.0 seq237293 141 4e-29 seq243231 87.8 7e-13 >seq354460 Length=442 Score = 690 bits (764), Expect = 0.0 Identities = 418/442 (95%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 44971 CCTGGGCCAGGTAAGCCGATTTTATGGCCTCGAAACCACCGAGCCGGAATTTCATGAAAT 45030 ||||||||| |||||| || ||||||||||||||||||||||||||||| |||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 45031 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 45090 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 45091 GAGAGCAGGCTGTACGCATACTTTCGTCGCGATAGATAATCGGGGATTCAGTAACATTCA 45150 ||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 45151 CGCCGGAGGTGAACTCAAACAGGACTCTGGCGTCGTTCTCGTATTGTTTTCCCCAGGCCA 45210 ||||||| ||||| ||||||||| |||||||||||||||||| |||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 45211 GTGCTTTGGCATTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 45270 ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 45271 AGTAGGACATTTTCATGTCAGGCCATTTCTTTCCTGAGCGGGGTTTTGCTATCACGTTGT 45330 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 45331 GAACTTCTGAAGCTGTAAGGACGCCGAGCCCGTATTTGTGCCACGCATCATCCCCCTGTT 45390 ||||||||||||| || | ||||||||||| ||||||||||||||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 45391 CGACAGCTCTCACGTCGATCCC 45412 ||||||||||||| |||||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 141 bits (156), Expect = 4e-29 Identities = 111/130 (85%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 55633 GTGATGAGGAAACTAACATTTGAACTAAGAAGCCCCATC-CATCAGCAGAACGCCATTCA 55691 || |||| |||||||| |||||| | || | ||| | |||||||| ||||| ||||| Sbjct 279 GTCATGAAAAAACTAACCTTTGAAATTCGAT-CTCCAGCACATCAGCAAAACGCTATTCA 221 Query 55692 AGCTATCCAGCAAATTCTTCCAGACCCAACCAAACCAATCGTAGTAACCATTCAGGAACG 55751 || | |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 CGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATTCAGGAACG 161 Query 55752 CAACCGCAGC 55761 |||||||||| Sbjct 160 CAACCGCAGC 151 Score = 122 bits (134), Expect = 3e-23 Identities = 69/70 (99%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 54820 ATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 54879 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 54880 TGGGGGAGAG 54889 |||||||||| Sbjct 293 TGGGGGAGAG 284 >seq243231 Length=365 Score = 87.8 bits (96), Expect = 7e-13 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 58927 ACGGTCAGAAAATACACTGGCGATAAAGAAGGAAAAAGACACGCTATTGTCAACGGTGTT 58986 ||||||||||||||| || |||||||| || |||| ||||| || ||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 58987 CTTATGGTTCATCGCGGATGG-GGTAAAGA 59015 || || ||||||||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191483803495600