Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq354460 744 0.0 seq243231 435 1e-117 seq291134 434 4e-117 seq404959 118 4e-22 seq237293 96.9 1e-15 >seq354460 Length=442 Score = 744 bits (824), Expect = 0.0 Identities = 430/442 (97%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 6169 CCTGGGCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 6228 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 6229 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCATTGCCGTCACTGCATAAACCATCGG 6288 ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 6289 GAGAGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 6348 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 6349 CGCCGGAAGTGAACTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 6408 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 6409 GTGCTTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCGGCAAGCAGGGTGTGGA 6468 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 6469 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGT 6528 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 6529 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTT 6588 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 6589 CGACAGCTCTCACGTCGATTCC 6610 ||||||||||||| ||||| || Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq243231 Length=365 Score = 435 bits (482), Expect = 1e-117 Identities = 253/261 (97%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 22924 CTACGAAAGAATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGG 22983 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 CTACGAAAAAATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGG 164 Query 22984 ATGCTACACGAACCTGATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCT 23043 ||||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||| Sbjct 165 ATGCTACACGAACCTGATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCT 224 Query 23044 GCTTATCTCGGTGGGCGATTTGGTTGATCGCGGTACAGAGAACGTAGAATGCCTGGAATT 23103 |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| Sbjct 225 GCTTATCTCGGTGGGCGATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATT 284 Query 23104 AATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGG 23163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 285 AATCACATTCCCCTGGTTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGG 344 Query 23164 CTTATCAGAGCGTGGAAACGT 23184 ||||||||||||||||||||| Sbjct 345 CTTATCAGAGCGTGGAAACGT 365 >seq291134 Length=410 Score = 434 bits (480), Expect = 4e-117 Identities = 343/410 (84%), Gaps = 1/410 (0%) Strand=Plus/Plus Query 50358 GGCTGCGGGCAGAAATGCAGGGGGAGATTGTGGCACTGGTCCACAGCCACCCCGGTGGTC 50417 |||||| |||||||| |||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1 GGCTGCAGGCAGAAAGGCAGGGTGAGATTGTGGCGCTGGTCCACAGCCACCCCGGTGGTC 60 Query 50418 TGCCCTGGCTGAGCGAGGCCGACCGGCGGCTGCAGATAAAAAGTGCACTGTCCTGGTGGC 50477 ||||||||||||| ||||||||||||||||||||| | | |||| || | ||||||| Sbjct 61 TGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAGTGATTTGCCGTGGTGGC 120 Query 50478 TGGTCTGCCGGGGGGAAATTCATAAATTCCGCTGTGTGCCACATCTGACAGGACGGCGCT 50537 |||||||||||||| |||||||| |||||||||||||| ||||| || || ||||||| Sbjct 121 TGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCATCTCACCGGGCGGCGCT 180 Query 50538 TTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGCCTACCATCTGGCGGGAA 50597 |||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||| | Sbjct 181 TTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGCTTATCATCTGGCGGGGA 240 Query 50598 TTGATATGCCGGATTTTGAGCGTGAGGATGACTGGTGGCGCAACGGTCAGAACCTTTACC 50657 |||| |||||||| ||| | || ||||||||||||||||| ||||| ||||| || | Sbjct 241 TTGAGATGCCGGACTTTCATCGGGAGGATGACTGGTGGCGTAACGGCCAGAATCTCCATA 300 Query 50658 TGGACAATATGGCGGTCACCGGCTTTTACCGGGTGACCCCTGTCCTCTGCACAGGCGGGC 50717 |||| ||| ||| || || || | || | |||| || |||| | |||||| ||||| Sbjct 301 TGGATAATCTGGAGGCGACGGGGCTGTATCAGGTG-CCGTTGTCAGCGGCACAGCCGGGC 359 Query 50718 GATATCCTGCTGTGCTGCTTTGGCGCATCGGTGGCCAATCATGCCGCCAT 50767 ||| | ||||||||||| ||||| |||| ||| | ||||| ||||| || Sbjct 360 GATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGCCGCAAT 409 >seq404959 Length=455 Score = 118 bits (130), Expect = 4e-22 Identities = 92/107 (86%), Gaps = 2/107 (2%) Strand=Plus/Minus Query 59954 GATCCGCGG-CACGTCGTATGCAAGAACGTGCCACGGCTGGCTGGCGAACTTTCGATAGT 60012 || |||| | ||||||||||||| |||||||| ||||||||||| |||||| ||||||| Sbjct 383 GAGCCGCAGACACGTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGT 324 Query 60013 GCGAGTATTGAATGATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 60058 ||| || ||||||||||||||| | |||||||||||| ||| |||| Sbjct 323 GCGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 >seq237293 Length=409 Score = 96.9 bits (106), Expect = 1e-15 Identities = 57/58 (98%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 17977 ATAA-AGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGGGGAGAGGGAAGTCATGAA 18033 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 329 ATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGGGGAGAGGGAAGTCATGAA 272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197555939390502