Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq51987 143 4e-29 seq53290 104 3e-17 >seq51987 Length=74397 Score = 143 bits (158), Expect = 4e-29 Identities = 177/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9727 ATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGA 9786 || || | ||| ||||| |||| |||||| || |||| || || || || ||||| || Sbjct 63336 ATGAGTCTAGTAGTTTGGAACAGCTGCTCATCCTCCCACTCTGGATGCTCCTGTTTCAGG 63277 Query 9787 ACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGC 9846 | || ||||||| ||||||||| ||||||||||| || || |||||||| || || || Sbjct 63276 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCTGGG 63217 Query 9847 ACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCA 9906 || |||||||||||||| | ||| || | ||| ||| | || || || | || | Sbjct 63216 ACCAAACCAAACACTTCCTGCCCAACAGAAAACTGCAAGTGCTCAGGTACATGAGGAGGG 63157 Query 9907 TACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACC 9966 || | ||| | |||| || || || || || || ||||||||||| || ||||| | | Sbjct 63156 TAGATCATCTCTGCCTGAGTTTCCTTCACTGTTGGTGGATACATTTCTCCATCAATCATC 63097 Query 9967 TG 9968 || Sbjct 63096 TG 63095 Score = 141 bits (156), Expect = 1e-28 Identities = 209/296 (71%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 8880 GGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGG 8939 |||| || | || ||||| || ||||||||| || ||||| ||| | || || | Sbjct 65338 GGAAAGCAGTGAAAGGACAGCCTTTCACATTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 65279 Query 8940 TTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGG 8999 | || | || || || || || | || ||||||||||| || ||||||||| | |||| Sbjct 65278 TATTAATTATTTCAAAGCCCACTTTTCCACCGAAGGTGCTAGGCTTCCAGTACTCAGGGG 65219 Query 9000 AGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGC 9059 ||||||| | || |||| || ||||||| || || || || || | ||| | || Sbjct 65218 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAATGGTGCTCCAATCTCCACCATTG 65159 Query 9060 TCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGA 9119 | ||||| ||||||||||| || || || ||||| || | | ||| | ||| || || | Sbjct 65158 TTTCACCAAAGATGGCACCTGGTCGTGGCTTTTCTACAAGAAGGCCTGGGTACAGCTCCA 65099 Query 9120 CAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 ||| || | ||| ||||| || |||||| ||| || || || || || || ||| Sbjct 65098 TAGCATCAATGTCTCCATAAAGCTCTTCCAGCTCAGCTGCCATTTCTTTTTCTCCT 65043 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/139 (74%), Gaps = 4/139 (3%) Strand=Plus/Minus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 ||||||| || | |||||| ||||||| |||||||| || || || |||||||||||| Sbjct 64468 TCAGGCAGAAGGGGGTGCCAGTGGTAGAGAGTATTGAATTCAGCTGCAATTCGGTTCTGG 64409 Query 9613 TACTGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACC 9670 || ||||| | ||| |||||| | || || ||||| | || | ||||||||| | Sbjct 64408 TATTGAAATTGCTGGT--TGAACAGCAGTTCAGGATCAAACTTGAGTTTGAAGTGGTAGC 64351 Query 9671 CGCTGAGTTGCTGGACATA 9689 | || | || || ||||| Sbjct 64350 CACTCAAGTGTTGCACATA 64332 >seq53290 Length=16747 Score = 104 bits (114), Expect = 3e-17 Identities = 189/277 (68%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 8902 CTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCTAAACCTAC 8961 |||||||||| || | ||| || || | ||| || || || || || || || Sbjct 8268 CTTCACATTGAGGCACACGAGTTTCTCAAGCGATGCTGTCTTAACTATCTCAAAGCCAGT 8327 Query 8962 GTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAG 9021 | || || || || ||||||||||||||| | |||||||||||| ||| | | || Sbjct 8328 TGCTCCACCAAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCGAGAAG 8387 Query 9022 CCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGG 9081 ||| |||| |||||||||||| || | ||| | ||||| || || || || || ||| Sbjct 8388 CCCCTTCAGGGAAAACGGAGCTCCGATCTCCACCATGCTTTCTCCAAAAATACCATTGGG 8447 Query 9082 ACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAG 9141 | ||||| || | | ||||| || | ||| | ||| || | ||| ||||| | Sbjct 8448 TTGGGGTTTCTCAAGCAGCAAGCCCAGATAAAATTCCAGAGCATCAATGTCTCCATACAA 8507 Query 9142 GGCTTCCAACTCGGCAGCTATCTCCTTCTCACCTACA 9178 |||||| ||| || || |||| | ||| ||| || Sbjct 8508 CTCTTCCAGCTCTGCCGCCTTCTCTTCCTCTCCTGCA 8544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 719155676474600