Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq319042 201 1e-46 >seq319042 Length=6524 Score = 201 bits (222), Expect = 1e-46 Identities = 372/543 (69%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 7040 GCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAA 7099 || || || || || || ||||| || || || | || ||||| ||||| || || || Sbjct 4280 GCACCATAAGCCACAGCTTCATCAGGATTGATGCTCTTGTTCAGCTCTTTGCCATTGAAG 4339 Query 7100 TAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATT 7159 ||||| | || || ||||| || ||||| || || || ||||| |||| ||||| Sbjct 4340 AAATCCTGCAGCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCACGATG 4399 Query 7160 TCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219 |||| | | |||||| |||| || | || || || | ||||| ||||| |||| Sbjct 4400 TCATGGATCTGCGATTTGTCGAGTTTGGCATCCCGCAGGGCCTTTTCCACAGGATCCAGG 4459 Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279 |||||||| ||| ||| || ||||| || || | |||||||||||| ||| Sbjct 4460 GTGCCACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATGTGTAG 4519 Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339 || |||| || || || | |||||||||||||| | | || | | ||||| | Sbjct 4520 AAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGAAGACAGA 4579 Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || |||||||| ||||| || || || || | ||||||| || | | ||| || Sbjct 4580 GTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCTCGCTG 4639 Query 7400 ATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT-GTCGA--AGGAGTCTCGAA 7456 || || ||||| || || || || || || || ||||| || || | | | | Sbjct 4640 ATGTCCTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGTT---G 4696 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||| ||||||||||| || || || || || | ||| || |||||||| || Sbjct 4697 TCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGCCA 4756 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | | || |||||||| || ||||| || |||||||| || || || Sbjct 4757 TCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAAGATAAGAACA 4816 Query 7577 TTC 7579 ||| Sbjct 4817 TTC 4819 Score = 86.0 bits (94), Expect = 8e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||||||||| || ||||| ||||| | || || | | |||||| | ||| Sbjct 3227 CCCTTATCATTTGTTATCGTGATCTTGTTCTCCTTGCCAGTGCTCTTATCAACCGCAGAC 3286 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 ||||||| || ||||| ||||||| ||| || |||| | ||| || ||| ||| || Sbjct 3287 ACATTCAGGATGCCATTGGCATCAATATCAAAGGTTACTTCAATCTGAGGTACACCTCTG 3346 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || || | |||||||| || | ||||| | || || || |||| ||| | | | | Sbjct 3347 GGAGCAGGGGGAATACCGGTCAGCTCAAACTTGCCCAGCAAGTTGTTGTCCTTAGTCATA 3406 Query 6815 TTACGTTCACCTTCATAGAC 6834 |||||| |||||||| || Sbjct 3407 GCACGTTCTCCTTCATATAC 3426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631120197691960