Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq394259 107 4e-18 seq380048 107 4e-18 seq166321 84.2 5e-11 >seq394259 Length=215 Score = 107 bits (118), Expect = 4e-18 Identities = 121/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || |||||||| || | || || || || ||||||||||| Sbjct 1 CCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCC 60 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 ||||| || || || ||||||||||||||||||||| ||| || ||||| ||| Sbjct 61 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACTTCCAGG 117 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || |||| || || || || | ||||| Sbjct 118 GTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 158 >seq380048 Length=211 Score = 107 bits (118), Expect = 4e-18 Identities = 121/161 (75%), Gaps = 6/161 (4%) Strand=Plus/Minus Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || || ||||| || | || || || || ||||||||||| Sbjct 211 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 152 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGG 195099 ||||| || || || ||||||||||||||||||||| ||| || || || ||| Sbjct 151 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGG 95 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| ||||||| || || ||||| | ||||| Sbjct 94 GTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 54 >seq166321 Length=11431 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||||||||| || | || || | |||||||| ||||||||||| || || | Sbjct 10508 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 10567 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||| || || || |||||||||||| Sbjct 10568 TCAGTCGCTGCTGATCAGGAGGAATGCCT 10596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102296951152373