Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq319042 125 6e-23 >seq319042 Length=6524 Score = 125 bits (138), Expect = 6e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| | || ||| | || |||||||| ||||| |||||||| || ||||| ||||| Sbjct 5083 GTTACTAACGCTGTAGTGACCGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 5024 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||| || || ||||| || || ||||||||||| || || ||| Sbjct 5023 AAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACAGCT 4964 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 |||||| | || ||||| || || ||| Sbjct 4963 GCTGCAATAGCCTATGGCCTGGACAAA 4937 Score = 95.1 bits (104), Expect = 1e-13 Identities = 138/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | || || ||| | || ||||| ||| |||||||| || | ||| |||| || Sbjct 6090 AGCTGTCGGAATTGATCTTGGCACCACCTATTCCTGTGTTGGCGTGTTCCAACATGGGAA 6031 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || ||||| ||||||||||| || |||||| | || || ||| || ||| | ||||| Sbjct 6030 GGTGGAAATCATTGCCAATGACCAGGGTAACCGGACCACGCCAAGCTACGTTGCCTTCAC 5971 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACC 550168 || ||||| | | || ||||| |||||| | |||| || || ||||| ||| Sbjct 5970 AGATACTGAGAGGCTGATCGGCGATGCTGCAAAAAACCAAGTTGCAATG--AATCCAACC 5913 Query 550169 AATACTATTTTTG 550181 ||||| |||||| Sbjct 5912 AATACAGTTTTTG 5900 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 552507 GGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCC 552566 |||||||| |||||||| | || ||||| || |||||||| || || ||||| |||||| Sbjct 3363 GGTATTCCCCCTGCTCCCAGAGGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCC 3304 Query 552567 AATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||| || |||||||| |||| |||||| Sbjct 3303 AATGGCATCCTGAATGTGTCTGCGGTTGATAA 3272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4002567163840310