Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_016160.1 Length=36661 Score E Sequences producing significant alignments: (Bits) Value seq375765 686 0.0 seq237293 123 6e-24 seq404959 114 3e-21 >seq375765 Length=403 Score = 686 bits (760), Expect = 0.0 Identities = 394/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 34195 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 34254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 34255 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGGCTTCGCCGG 34314 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 34315 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 34374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 34375 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 34434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 34435 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAGGGAACTGATAACG 34494 |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 34495 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGAGGAGAGCTATTCACTG 34554 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 34555 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 34597 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq237293 Length=409 Score = 123 bits (136), Expect = 6e-24 Identities = 70/71 (99%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 30497 GATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 30556 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 GATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 295 Query 30557 TTGGGGGAGAG 30567 ||||||||||| Sbjct 294 TTGGGGGAGAG 284 >seq404959 Length=455 Score = 114 bits (126), Expect = 3e-21 Identities = 82/93 (88%), Gaps = 1/93 (1%) Strand=Plus/Minus Query 20704 TCGTATGCAAGAACGTGCTGCAGCTGGCTGGCGAACTTTCGATAGTGCGAGTATTGAATG 20763 ||||||||| ||||||||||| ||||||||| |||||| |||||||||| || ||||||| Sbjct 369 TCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTGAATG 310 Query 20764 ATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 20795 |||||||| | |||||||||||| ||| |||| Sbjct 309 ATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116490221518594