Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq375765 691 0.0 seq243231 590 2e-164 seq237293 475 9e-130 >seq375765 Length=403 Score = 691 bits (766), Expect = 0.0 Identities = 395/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 16539 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 16598 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 16599 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGACTTCGCCGG 16658 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 16659 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTCATCGGCTACATCGGTACTGACTC 16718 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 16719 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 16778 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 16779 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCGTGGTCAGAGGGAACTGATAACG 16838 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 16839 GACGACAGAAAACCAGAAATCATGGTTATGACGTCATTGTTGGCGGAGAGCTATTCACTG 16898 |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 16899 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 16941 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq243231 Length=365 Score = 590 bits (654), Expect = 2e-164 Identities = 350/365 (96%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 14271 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 14330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 60 Query 14331 ACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAATTGAT 14390 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 61 ACGTTCTCATCGTTCATCGCGGATGGAGGGAAAGAGATGCGCTACTACGAAAAAATTGAT 120 Query 14391 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 14450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 180 Query 14451 ATGAAAAAACTGGAGGCGATAGGATTCGACACCAAAAAAGACCTGCTTATCTCGGTTGGC 14510 ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 181 ATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGC 240 Query 14511 GATTTGGTCGATCGCGGTACAGAGAACGTCGAATGTATGGAATTAATCACATTCCCCTGG 14570 |||||||| ||||| ||| |||||||||| ||||| ||||||||||||||||||||||| Sbjct 241 GATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGG 300 Query 14571 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGA 14630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGA 360 Query 14631 AACGT 14635 ||||| Sbjct 361 AACGT 365 >seq237293 Length=409 Score = 475 bits (526), Expect = 9e-130 Identities = 278/288 (97%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 11895 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 11954 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 229 Query 11955 GCTATTCACGCGGTACAGCAAATTCTTCCAGACCCAACCAAACCAATCGTAGTAACCATT 12014 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 228 GCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATT 169 Query 12015 CAGGAACGCAACCGCAGCTTAGACCAAAATCGGAAGCTTTGGGCTTGCCTTGGTGACGTC 12074 ||||||||||||||||||||||||||||| |||||||| ||||| | | | |||| |||| Sbjct 168 CAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTGGCGTC 109 Query 12075 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 12134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 49 Query 12135 ACCGCAGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 12182 ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 48 ACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125984891841424