Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq408179 286 1e-72 seq389875 140 9e-29 >seq408179 Length=355 Score = 286 bits (316), Expect = 1e-72 Identities = 275/353 (78%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 3264 GGTTATCCCGGCTGGATGGCGCAGAACTGGACCTACATTCCTCGCGAACTACCCGGCGGT 3323 || ||||| ||||||||| ||||||| ||||| | || || || || |||||||||| Sbjct 2 GGGTATCCTGGCTGGATGCCGCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGG 61 Query 3324 CGACCTTCATTTATCCATGTATTCGAACCGATGGAGGATGGACAGACCCGTGGGGCCAAT 3383 || | || | || || || || ||||| |||||| || |||| || || || ||| Sbjct 62 CGCGCCTCGGTCATTCACGTTTTTGAACCCGGGGAGGACGGGCAGAATCGCGGTGCAAAT 121 Query 3384 GCGTTTTACAGCGTGATGGAGCAGATGAAAATGCTCGATACCCTGCAAAATACCCAGCTC 3443 | ||||||||||||||||||||||||||| |||||||| || ||||| || || ||||| Sbjct 122 GTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTCGACACGCTGCAGAACACGCAGCTG 181 Query 3444 CAGAGCGCGATAGTGAAGGCTATGTATGCCGCTACCATCGAGAGTGAACTGGATACCCAA 3503 |||||||| || |||||||| ||||||||||| ||||| |||||||| |||||||| || Sbjct 182 CAGAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAG 241 Query 3504 TCGGCGATGGACTTTATTCTCGGCGCGGATAATAAAGAGCAGCAGAGCAAACTTACGGGC 3563 || |||||||| |||||||| |||||| | | | | ||||||| | | || || ||| Sbjct 242 TCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGGC 301 Query 3564 TGGCTCGGTGAAATGGCGTCCTATTACTCAGCTGCGCCTGTTCGCCTGGGTGG 3616 ||| | |||||||| || | |||||| | || ||||| || || ||||| || Sbjct 302 TGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCGCCGGTCCGGCTGGGAGG 354 >seq389875 Length=300 Score = 140 bits (154), Expect = 9e-29 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 2458 GAACTGGATGCCGCGCGCGCTGCGTTACATGACCTGATGATGGGAAAGCGCGTGGCGACG 2517 ||||| | || || || || || | ||||||||||||| || || || ||||| || Sbjct 220 GAACTTGCCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACA 161 Query 2518 GTACAGAAAGACGGTCGAAGAGTGGAATTTACAGCCACTTCAGTCAGCGATCTCAAAAAA 2577 |||||||||||||| ||||| ||||| ||||| |||||||| || || || |||||| Sbjct 160 GTACAGAAAGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAA 101 Query 2578 TATATTGCTGACCTTGAATCTCAGGTTGGCACCACATCACGACGCCGGGGGCCAGCAGGG 2637 |||||||| || || ||| ||| |||| ||| |||||| |||| || ||||| Sbjct 100 TATATTGCAGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGA 41 Query 2638 TTTTACGTATGAAAA 2652 ||||| ||||||||| Sbjct 40 TTTTATGTATGAAAA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141026867036286