Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019705.1 Length=38759 Score E Sequences producing significant alignments: (Bits) Value seq375765 691 0.0 seq237293 574 1e-159 seq404959 95.1 3e-15 >seq375765 Length=403 Score = 691 bits (766), Expect = 0.0 Identities = 395/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 35304 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 35363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 35364 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGACTTCGCCGG 35423 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 35424 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTCATCGGCTACATCGGTACTGACTC 35483 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 35484 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 35543 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 35544 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAGGGAACTGATAACG 35603 |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 35604 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTCACTG 35663 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 35664 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 35706 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq237293 Length=409 Score = 574 bits (636), Expect = 1e-159 Identities = 339/353 (96%), Gaps = 0/353 (0%) Strand=Plus/Minus Query 31218 ATGATCATCTACATCACTGAGCTTGTAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 31277 |||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 31278 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCGGCACATCAGC 31337 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 293 TGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGC 234 Query 31338 AAAACGCTATTCACGCGGTACAGCAAATCCTTCCAGACCCAACCAAGCCAATCGTAGTGA 31397 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct 233 AAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAA 174 Query 31398 TCATTCAGGAGCGCAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCTTAGGTG 31457 ||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 173 CCATTCAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTG 114 Query 31458 ACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTG 31517 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 113 GCGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTG 54 Query 31518 TGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGAAAT 31570 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 53 TGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq404959 Length=455 Score = 95.1 bits (104), Expect = 3e-15 Identities = 86/106 (81%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 19695 GCCGCAACCATGCCGTATGCAAGAGCATGACTGCGGCTGACTGGCTCACGTCCGATAGTG 19754 |||||| || | |||||||| || | || ||||||||| |||| || |||||||||| Sbjct 381 GCCGCAGACACGTCGTATGCAGGAACGTG-CTGCGGCTGGCTGGTGAACTTCCGATAGTG 323 Query 19755 CGAGTATTGAATGATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 19799 || || ||||||||||||||| | |||||||||||| ||| |||| Sbjct 322 CGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123163527494238