Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019714.1 Length=39026 Score E Sequences producing significant alignments: (Bits) Value seq375765 682 0.0 seq243231 590 2e-164 seq237293 475 9e-130 seq404959 86.0 2e-12 >seq375765 Length=403 Score = 682 bits (756), Expect = 0.0 Identities = 393/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 35572 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 35631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 35632 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGGCTTCGCCGG 35691 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 35692 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTCATCGGCTACATCGGTACTGACTC 35751 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 35752 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 35811 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 35812 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAGGGAACTGATAACG 35871 |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 35872 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTTGGCGGAGAGTTATTCACTG 35931 |||||||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 35932 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 35974 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq243231 Length=365 Score = 590 bits (654), Expect = 2e-164 Identities = 350/365 (96%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 33441 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 33500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 60 Query 33501 ACGTTCTTATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAGAATTGAT 33560 ||||||| || ||||||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct 61 ACGTTCTCATCGTTCATCGCGGATGGAGGGAAAGAGATGCGCTACTACGAAAAAATTGAT 120 Query 33561 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 33620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 180 Query 33621 ATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCTGCTTATCTCGGTTGGC 33680 ||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 181 ATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGC 240 Query 33681 GATTTGGTCGATCGCGGTACAGAGAACGTCGAATGCCTGGAATTAATCACATTCCCCTGG 33740 |||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 241 GATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGG 300 Query 33741 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGAGGA 33800 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 301 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGA 360 Query 33801 AACGT 33805 ||||| Sbjct 361 AACGT 365 >seq237293 Length=409 Score = 475 bits (526), Expect = 9e-130 Identities = 278/288 (97%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 31572 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 31631 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 288 GAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAAC 229 Query 31632 GCTATTCACGCGGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATT 31691 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 228 GCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCATT 169 Query 31692 CAGGAACGCAACCGCAGCTTAGACCAGAATCGAAAGCTTTGGGCTTGCCTTGGTGACGTC 31751 |||||||||||||||||||||||||| || || ||||| ||||| | | | |||| |||| Sbjct 168 CAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTGGCGTC 109 Query 31752 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 31811 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 TCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTTT 49 Query 31812 ACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 31859 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48 ACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq404959 Length=455 Score = 86.0 bits (94), Expect = 2e-12 Identities = 84/106 (79%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 20567 GCCGCAACCATGCCGTATGCAAGAGCATGATTGCGGCCGACTAGCGAACGTTCGATAGTG 20626 |||||| || | |||||||| || | || | ||||| | || | |||| | |||||||| Sbjct 381 GCCGCAGACACGTCGTATGCAGGAACGTGCT-GCGGCTGGCTGGTGAACTTCCGATAGTG 323 Query 20627 CGAGTATTGAATGATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 20671 || || ||||||||||||||| | |||||||||||| ||| |||| Sbjct 322 CGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124012799513064