Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019715.1 Length=39578 Score E Sequences producing significant alignments: (Bits) Value seq403192 735 0.0 seq375765 673 0.0 seq243231 600 3e-167 seq237293 594 1e-165 seq404959 80.6 7e-11 >seq403192 Length=430 Score = 735 bits (814), Expect = 0.0 Identities = 421/430 (98%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 28726 AGCTCAGGCGAGAACATCCCGGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 28785 |||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 60 Query 28786 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 28845 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 120 Query 28846 GGGCTAAATTCTTCAACGCTAACGTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCA 28905 ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 121 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCA 180 Query 28906 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGTCCCATCCCCATCTTG 28965 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 181 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 240 Query 28966 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATAGCTTTA 29025 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 241 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTA 300 Query 29026 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGT 29085 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 301 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGT 360 Query 29086 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 29145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 420 Query 29146 AGCGGTGATA 29155 ||||||||| Sbjct 421 GGCGGTGATA 430 >seq375765 Length=403 Score = 673 bits (746), Expect = 0.0 Identities = 391/403 (97%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 36120 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 36179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 36180 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGGCTTCGCCGG 36239 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 36240 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 36299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 36300 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGGAA 36359 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 36360 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAAGGAACGGATAACG 36419 |||||||||||||||||| |||||||||||||||||| ||||| || ||||| ||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 36420 GACGGCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 36479 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 36480 ATTACTCCGATCACCCTCGCAAGCTTGTCACGCTAAACCCCAA 36522 |||||||||||||||||||||| ||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq243231 Length=365 Score = 600 bits (664), Expect = 3e-167 Identities = 352/365 (96%), Gaps = 0/365 (0%) Strand=Plus/Plus Query 34227 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 34286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCGGTACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACG 60 Query 34287 ACGTTCTCATGGTTCATCGCGGATGGAGTGAAAGAGATGCGCTATTACGAAAAAATTGAT 34346 |||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 61 ACGTTCTCATCGTTCATCGCGGATGGAGGGAAAGAGATGCGCTACTACGAAAAAATTGAT 120 Query 34347 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 34406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG 180 Query 34407 ATGAAAAAACTGGAGACGATAGGATTCGACACCAAAAAAGACCTGCTTATCTCGGTTGGC 34466 ||||| |||||||| ||||| |||||||||| |||||||||||||||||||||||| ||| Sbjct 181 ATGAACAAACTGGATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGC 240 Query 34467 GATTTGGTCGATCGCGGTACAGAGAACGTCGAATGCCTGGAATTAATCACATTCCCCTGG 34526 |||||||| ||||| ||| |||||||||| |||||||||||||||||||||||||||||| Sbjct 241 GATTTGGTTGATCGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGG 300 Query 34527 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGCGGA 34586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 301 TTCAGAGCTGTACGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGA 360 Query 34587 AACGT 34591 ||||| Sbjct 361 AACGT 365 >seq237293 Length=409 Score = 594 bits (658), Expect = 1e-165 Identities = 344/354 (97%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 32313 GATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 32372 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 GATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 295 Query 32373 TTGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCGGCACATCAG 32432 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 294 TTGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAG 235 Query 32433 CAAAACGCTATTCACGCGGTACAGCAAATTCTTCCAGACCCAACCAAACCAATCGTAGTA 32492 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 234 CAAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTA 175 Query 32493 ACCATTCAGGAACGCAACCGCAGCTTAGACCAAAACAGGAAGCTATGGGCCTGCTTAGGT 32552 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct 174 ACCATTCAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGT 115 Query 32553 GACGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGT 32612 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 114 GGCGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGT 55 Query 32613 GTTTTTACAGCAGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 32666 || ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 54 GTGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq404959 Length=455 Score = 80.6 bits (88), Expect = 7e-11 Identities = 83/106 (78%), Gaps = 2/106 (2%) Strand=Plus/Minus Query 20519 GCCGCAACCATGCCGTATGCAAGAGCATGATTGCGGCCGACTAGCGAACGTTCGATAGTG 20578 |||||| || | |||||||| || | || | ||||| | || | |||| | |||||||| Sbjct 381 GCCGCAGACACGTCGTATGCAGGAACGTGCT-GCGGCTGGCTGGTGAACTTCCGATAGTG 323 Query 20579 CGAGTATTGAATGATTTCAAGCCGTTACCGATTTTAC-TATGTTTT 20623 || || |||||||||||| || | |||||||||||| ||| |||| Sbjct 322 CGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125768597844120