Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019717.1 Length=45366 Score E Sequences producing significant alignments: (Bits) Value seq408179 315 2e-81 seq243231 132 1e-26 seq389875 131 5e-26 >seq408179 Length=355 Score = 315 bits (348), Expect = 2e-81 Identities = 282/354 (80%), Gaps = 0/354 (0%) Strand=Plus/Plus Query 3263 CGGTTATCCTGGTTGGATGGCGCAGAACTGGACCTACATACCTCGCGAGCTCCCCGGAGG 3322 ||| |||||||| |||||| ||||||| ||||| | ||||| || ||| | ||||| || Sbjct 1 CGGGTATCCTGGCTGGATGCCGCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGG 60 Query 3323 GCGCCCCTCTTTTATCCATGTCTTCGAACCGATAGAGGACGGACAGACCCGTGGAGCCAA 3382 |||| |||| | || || || || ||||| |||||||| |||| || || || || Sbjct 61 GCGCGCCTCGGTCATTCACGTTTTTGAACCCGGGGAGGACGGGCAGAATCGCGGTGCAAA 120 Query 3383 TGCGTTTTACAGCGTTATGGAGCAGATGAAAATGCTCGATACCCTGCAAAACACCCAGCT 3442 || |||||||||||| |||||||||||||| |||||||| || ||||| ||||| ||||| Sbjct 121 TGTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTCGACACGCTGCAGAACACGCAGCT 180 Query 3443 CCAGAGTGCGATAGTGAAGGCCATGTATGCTGCCACCATCGAGAGTGAGCTGGATACGCA 3502 ||||| || || |||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct 181 GCAGAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCA 240 Query 3503 GACGGCGATGGATTTCATTCTCGGCGCGGATAATAAAGAGCAGCAGAGCAAACTGACGGG 3562 | | ||||||||||| ||||| |||||| | | | | ||||||| | | ||||| || Sbjct 241 GTCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGG 300 Query 3563 CTGGCTCGGTGAAATGGCGTCCTATTACTCAGCTGCGCCGGTTCGCCTGGGTGG 3616 |||| | |||||||| || | |||||| | || |||||||| || ||||| || Sbjct 301 CTGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCGCCGGTCCGGCTGGGAGG 354 >seq243231 Length=365 Score = 132 bits (146), Expect = 1e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 40635 CGCAATATCTTCGTCGTCGGCGATCTGCATGGGTGCTACACGCTGCTGATGAATGAGCTC 40694 || ||||| | || || ||||||||||| || ||||||||| |||||||| | || Sbjct 133 CGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTGATGAACAAACTG 192 Query 40695 GAAAAGGTTTCGTTCGACCCTGCGCGTGATTTGCTGATCTCGGTTGGTGACCTTGTTGAC 40754 || | | || |||||| || |||| |||||||| || || | ||||| Sbjct 193 GATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGCGATTTGGTTGAT 252 Query 40755 CGCGGCGCGGAAAACGTCGAGTGCCTGGATCTGATTACTATGCCGTGGTTCAGGGCAGTG 40814 || || || || ||||| || |||||||| | || || | || |||||||| || || Sbjct 253 CGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGGTTCAGAGCTGTA 312 Query 40815 CGCGGTAACCATGAGCAGATGATGGTTGATGGGCTTTCAGAGCATGGAAACGT 40867 || || ||||||||||| |||||| ||||||| | ||||||| ||||||||| Sbjct 313 CGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGAAACGT 365 >seq389875 Length=300 Score = 131 bits (144), Expect = 5e-26 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 2458 GAACTGGATGCCGCGCGCGCTGCGTTACATGACCTGATGATGGGAAAGCGCGTGGCGACG 2517 ||||| | || || || || || | ||||||||||||| || || || ||||| || Sbjct 220 GAACTTGCCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACA 161 Query 2518 GTACAGAAAGACGGTCGAAGAGTGGAATTTACAGCCACATCAGTCAGCGATCTCAAAAAA 2577 |||||||||||||| ||||| ||||| ||||| ||||| || || || || |||||| Sbjct 160 GTACAGAAAGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAA 101 Query 2578 TATATTGCTGACCTTGAATCTCAGGTTGGTACCACATCACGACGCCGGGGGCCAGCAGGG 2637 |||||||| || || ||| ||| || | ||| |||||| |||| || ||||| Sbjct 100 TATATTGCAGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGA 41 Query 2638 TTTTACGTATGAAAA 2652 ||||| ||||||||| Sbjct 40 TTTTATGTATGAAAA 26 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144179033967584