Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019719.1 Length=41528 Score E Sequences producing significant alignments: (Bits) Value seq375765 691 0.0 seq237293 114 3e-21 seq404959 113 1e-20 >seq375765 Length=403 Score = 691 bits (766), Expect = 0.0 Identities = 395/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 37960 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 38019 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 38020 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGACTTCGCCGG 38079 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 38080 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 38139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 38140 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGAAA 38199 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 38200 TCAATAATCAACGCAAGGCGTTCCTCGATATGCTGGCGTGGTCAGAGGGAACTGATAACG 38259 ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 38260 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTTGGCGGAGAGCTATTCACTG 38319 |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 38320 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 38362 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq237293 Length=409 Score = 114 bits (126), Expect = 3e-21 Identities = 68/71 (96%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 33645 GATGACCATCTACATCACTGAGCTTGTAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 33704 ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 354 GATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 295 Query 33705 TTGGGGGAGAG 33715 ||||||||||| Sbjct 294 TTGGGGGAGAG 284 >seq404959 Length=455 Score = 113 bits (124), Expect = 1e-20 Identities = 82/94 (87%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 20676 GTCGTATGCAAGAACGGGCGGCGGCTGGCTGGCGAACTTACGATAGTGCGAGTATTGAAT 20735 |||||||||| ||||| || |||||||||||| |||||| |||||||||| || |||||| Sbjct 370 GTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTGAAT 311 Query 20736 GATTTCCAGCCGTTACCGATTTTAC-TATGTTTT 20768 ||||||||| | |||||||||||| ||| |||| Sbjct 310 GATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131971146296220