Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019769.1 Length=38964 Score E Sequences producing significant alignments: (Bits) Value seq403192 753 0.0 seq375765 682 0.0 seq237293 571 1e-158 seq404959 98.7 2e-16 >seq403192 Length=430 Score = 753 bits (834), Expect = 0.0 Identities = 425/430 (99%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 27529 AGCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 27588 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 60 Query 27589 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 27648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 120 Query 27649 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCA 27708 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCA 180 Query 27709 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 27768 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 240 Query 27769 TCTGCGACAGATTCCTGGGGTAAGCCAAGTTCAtttttctttttttCATAAATTGCTTTA 27828 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 241 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTA 300 Query 27829 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGCGCTCATACGT 27888 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 301 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGT 360 Query 27889 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 27948 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 420 Query 27949 AGCGGTGATA 27958 ||||||||| Sbjct 421 GGCGGTGATA 430 >seq375765 Length=403 Score = 682 bits (756), Expect = 0.0 Identities = 393/403 (98%), Gaps = 0/403 (0%) Strand=Plus/Minus Query 34627 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGGGCGTTTACAAAAACAGTAAT 34686 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 403 GTTTGCAATGGCGTACCTTCGCGGCAGATATAATGGCGGTGCGTTTACAAAAACAGTAAT 344 Query 34687 CGACGCAACGATGTGCGCCATTATCGCCTGGTTCATTCGTGACCTTCTCGGCTTCGCCGG 34746 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct 343 CGACGCAACGATGTGCGCCATTATCGCCTAGTTCATTCGTGACCTTCTCGACTTCGCCGG 284 Query 34747 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 34806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 283 ACTAAGTAGCAATCTCGCTTATATAACGAGCGTGTTTATCGGCTACATCGGTACTGACTC 224 Query 34807 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTGGGAA 34866 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 223 GATTGGTTCGCTTATCAAACGCTTCGCTGCTAAAAAAGCCGGAGTAGAAGATGGTAGAAA 164 Query 34867 TCAATAATCAACGTAAGGCGTTCCTCGATATGCTGGCATGGTCAGAGGGAACTGATAACG 34926 |||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| Sbjct 163 TCAATAATCAACGTAAGGGGTTCCTCGATATGCTGGCGTGGTCGGAGGGAACTGATAACG 104 Query 34927 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTCACTG 34986 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 103 GACGTCAGAAAACCAGAAATCATGGTTATGACGTCATTGTAGGCGGAGAGCTATTTACTG 44 Query 34987 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCCAA 35029 |||||||||||||||||||||||||||||||||||||||| || Sbjct 43 ATTACTCCGATCACCCTCGCAAACTTGTCACGCTAAACCCAAA 1 >seq237293 Length=409 Score = 571 bits (632), Expect = 1e-158 Identities = 339/354 (96%), Gaps = 0/354 (0%) Strand=Plus/Minus Query 31080 GATGACCATCTACATCACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 31139 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 GATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTAT 295 Query 31140 TTGGGGGAGAGGGAAGTCATGAAAAAACTAATCTTTGAAATTCGATCTCCAGTACATCAG 31199 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 294 TTGGGGGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAG 235 Query 31200 CAAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTA 31259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 234 CAAAACGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTA 175 Query 31260 ACCATTCAGGAACGCAACCGCAGCTTAGACCAGAATCGGAAGCTTTGGGCTTGCCTTGGT 31319 |||||||||||||||||||||||||||||||| || |||||||| ||||| | | | ||| Sbjct 174 ACCATTCAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGT 115 Query 31320 GACGTTTCGCGTCAGGTTGAATGGCATGGGCGCTGGCTGGATGCAGAAAGCTGGAAGTGT 31379 | ||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 114 GGCGTCTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGT 55 Query 31380 GTGTTTACCGCAGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 31433 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 54 GTGTTTACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 >seq404959 Length=455 Score = 98.7 bits (108), Expect = 2e-16 Identities = 79/94 (84%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 20164 GTCGTATGCAAGCACGAGCCACGGCTGGCTGTCTAACTTTCGATAGTGCGAGTATTGAAT 20223 |||||||||| | ||| || |||||||||| ||||| |||||||||| || |||||| Sbjct 370 GTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGATAGTGCGGGTGTTGAAT 311 Query 20224 GATTTCCAGCCGCTACCGATTTTAC-TATGTTTT 20256 ||||||||| |||||||||||||| ||| |||| Sbjct 310 GATTTCCAGTTGCTACCGATTTTACATATTTTTT 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123815590280228