Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq354460 365 1e-96 >seq354460 Length=442 Score = 365 bits (404), Expect = 1e-96 Identities = 346/442 (78%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 11723 CCTGAGCCATGTAGGCCGACTTAATGGCTTCAAATCCGCCGAGGCGGAATTTCATGAAGT 11782 |||| |||||||| || ||||| ||||| || || || ||||| ||||| |||||||| | Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 11783 CGCGAGAAGTGAAAGGGCACTTAAGCTCAAGCCCGCGGCCATCACTGCAAAGCCCGTCCG 11842 | || || || || ||||| || || ||||| ||| ||| |||||||| | || || | Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 11843 GTGAGCATGCAGTGCGCATGGTTTCGTCCTTGTAGATAATCGGCGACTCGGTTACCTGAA 11902 | ||||| || || ||||| ||||||| ||||| ||||| || || || || | | Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 11903 CGCCGGCAGTAAATTCAAACAGGGCTCTTGCGTCATCCTCGTATTGTTTGCCCCATGCCA 11962 |||||| ||| ||||||||||||| ||| ||||| | |||||| ||||| ||||| |||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 11963 GAGCCCTGGCATTAACTTCAGGAGCTACGCCGGTACACACCTCAGCGAGAAGGGTGTGGA 12022 | || | || |||||||| ||||| || ||||| || |||||||| || |||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 12023 AGTAAGACATCTTCATGTCCGGCCATTTTTTACCTGAGCGTGGTTTTGATATGACGTTAT 12082 |||| ||||| |||||||| ||||| || || || ||||| ||||||| ||| ||||| | Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 12083 GAACATCTGATGCGGTGATAACTCCGAGGCGCAGCCTCTGCCACGCCTCATCTCCCTGTT 12142 |||| ||||| |||||||| || ||||| || | | |||||||| ||||| ||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 12143 CGACCGTGAGCACATCTATCCC 12164 |||| | |||||| ||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151319916672694