Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq39562 248 1e-60 seq435555 134 2e-26 seq83088 109 6e-19 >seq39562 Length=8284 Score = 248 bits (274), Expect = 1e-60 Identities = 604/909 (66%), Gaps = 7/909 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||| ||||| || || |||| ||||| || || || |||||| || ||| |||| Sbjct 4523 TGTCTCGCAAATACTCTTCCAAACATTTTACTGCAAAAGGGTCAACATCAGTGTCAAATT 4464 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| ||| |||| ||||||| || |||||| ||| || | Sbjct 4463 TATTAGCAAAGAAGTGGTG---GTTTCGTAGCATCCAGTTCAGGTCTCCTACCCCAAAAA 4407 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 ||||| || || | ||| || || ||||| || ||||| | || ||||| | ||| | Sbjct 4406 TACAGACAGAGCGAACGTGAACTCCATTGCATGGTGGGTAGGGTGCACCTTTGGACACAT 4347 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 ||||||| ||||||||||||| ||||||||||| | || | |||||| || ||||| Sbjct 4346 CACCTTCAAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACGTCGT 4287 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | || | || || | ||| ||||| || || | || || | ||| | || |||||| Sbjct 4286 ACTTCT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 4228 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| ||||| || | ||| || ||||||| ||| ||| Sbjct 4227 AGGTACTCATCTGGGCTGTAAGTGTCTTTTGCCCACTCAATGAACTTAAGTATTTTGCTG 4168 Query 160404 TCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAAT 160463 | || | | || | |||| | || ||||| || || || || || || Sbjct 4167 CTTTCTAATACATATGCTACAAATCTTCTGCTAACTACAAAATAGGCACTACCAGAAAAA 4108 Query 160464 ATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTC 160523 || || | | ||| || | |||||| || ||||| | || | Sbjct 4107 ATTGGAGTACTAAGAGGTGGTAGTTGTTTGTCTATGCCTGTGTTCTTTATTTTACCATCA 4048 Query 160524 ACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCT 160583 | | | | || | || |||||||| || || || | ||||| ||| || || Sbjct 4047 ATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATGAAGAGGCATTTTTTCTGTTTCC 3988 Query 160584 AGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGC 160643 | ||||| |||| | || | ||| | | || || || ||| |||| ||||| | Sbjct 3987 AAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCTTGGTTGGTCTTTATA 3928 Query 160644 GGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGG 160703 |||||||| | || || | |||||| | ||| ||||| | | || || || Sbjct 3927 GGAAAGTCCATGCCACAGAGGTTTATTAGGTATTTCCAGTCTGAACTTCTTCTGTAGAGA 3868 Query 160704 TCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCT 160763 || ||||||| ||||| |||||||| || | |||||| ||||| || || || ||||| Sbjct 3867 TCTTTCATGCAGTTAATGTCTGCCTGTACCCTGCTCCATGAAGCATATACAACACTCTCT 3808 Query 160764 AGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAG 160823 | | |||| | |||||| ||||| |||||||| || |||||| ||| | ||| || Sbjct 3807 AACTGGCTGGAAATAAAGACATTATCAAAACACGAGACTATTCCCTTCACAG-CAGCAAA 3749 Query 160824 AACATCTTAT-CCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGAT 160882 || | || | | |||| ||| || || | ||| || | |||||||| || ||||| Sbjct 3748 AAAAGATTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATAGAT 3689 Query 160883 GGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTAT 160942 | || || | || || | |||||| || || |||| | ||| | |||||||| || Sbjct 3688 TGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTACTGAGTAGGCAAT 3629 Query 160943 CGGAAACTC 160951 ||||| || Sbjct 3628 TGGAAATTC 3620 >seq435555 Length=6688 Score = 134 bits (148), Expect = 2e-26 Identities = 237/346 (68%), Gaps = 11/346 (3%) Strand=Plus/Plus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || ||||| |||| |||| |||| || |||||| Sbjct 204 CTGTGGCGCAGGTGCTCCTCGAGACACTGGATGGCGGCGTCGTCCACCAGGGGGTCGAAC 263 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | ||| || |||||| ||||||| || | |||| | Sbjct 264 TTGTTGGCCAAGAGGTGGTGC---TGCTGGAGCATCCAGGGCACGTCGCCCGCCCCGTAG 320 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 |||||||| | || |||| |||| | || |||||||| | || || || | Sbjct 321 ACGCAGACAGCGCGCTGGTGCTGGCCGGTACAGGGCGGGTAGGGCGCGCCCTTGCTGGTG 380 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 || || || |||||||||||| || | | || | || | |||||| ||| | | Sbjct 381 TCGCCCTCCAGGTACTGCCACTTGACCAGGCGGGGCAGGGCGTTCATGTCTGAGAGCTGG 440 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || |||| | ||| || || ||||||||||| |||||||||| Sbjct 441 AACTTGTCATTCTGGGGCATGGCGCCCGGCACGCCGGGCAT--------GGGTGGCCCAG 492 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT 160389 | ||| ||||| |||||||| |||||||| | ||| || | ||||| Sbjct 493 ACGTGCTCGTCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACT 538 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 160838 CTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCT 160897 ||| | ||| ||||| ||||| || | |||||| || ||||||| || || || | || Sbjct 836 CTTGCCGTCAACGTGGACGCAGTAGACGTTCTGGGGGGCGTAGAGGGACCGCAGGAGCCG 895 Query 160898 CTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTCGGTCTC 160957 |||||||||||| || || | ||||| || || |||||||| || || ||||| | ||| Sbjct 896 CTCGAACATCTCGATTTTGTTGTGGATGACCATGGAGTAGGCGATGGGGAACTCCGCCTC 955 Query 160958 CTCGCGACTCAG 160969 ||| | ||||| Sbjct 956 CTCCTGGCTCAG 967 >seq83088 Length=6024 Score = 109 bits (120), Expect = 6e-19 Identities = 186/270 (69%), Gaps = 0/270 (0%) Strand=Plus/Plus Query 160700 CAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTT 160759 ||||||| |||||| || | || ||||||| ||| |||||| || || || || || Sbjct 236 CAGGTCCTGCATGCAGTTGAGGTCGGCCTGCAGCCGGGACCAGGAGGCATAGACCACCTT 295 Query 160760 CTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG 160819 || || || ||||||||||| || ||| || | ||||| || ||| ||| Sbjct 296 TTCCAGGCGGCTAGCCACAAAGACATTGGGGAAGCAGGCTACGATGGCCCGCACGGCCTC 355 Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879 ||| | ||| | ||| ||||| ||||| || | |||||| || ||||| Sbjct 356 CTGGAAGGCGGCCGGGGACTTGCCGTCAACGTGGACGCAGTAGACGTTCTGGGGGGCGTA 415 Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939 || || || || | || |||||||||||| || || | ||||| || || |||||||| Sbjct 416 GAGGGACCGCAGGAGCCGCTCGAACATCTCGATTTTGTTGTGGATGACCATGGAGTAGGC 475 Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 || || ||||| | |||||| | ||||| Sbjct 476 GATGGGGAACTCCGCCTCCTCCTGGCTCAG 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573572480614440