Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq354460 338 2e-88 seq408179 286 1e-72 seq243231 136 1e-27 seq389875 122 3e-23 seq404959 96.9 1e-15 >seq354460 Length=442 Score = 338 bits (374), Expect = 2e-88 Identities = 340/442 (77%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 28159 CCTGGGCCATGTACGCAGACTTGATGGCTTCGAAACCGCCAAGGCGGAATTTCATGAAGT 28218 ||||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||| | Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 28219 CGCGGGAGGTGAAAGGGCATTTAAGCTCAAGGCCGAACCCGTTACTGCACAGGCCGTCAG 28278 | |||||||| || |||||||| || ||||||||| |||| |||||| | || || | Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 28279 GGGAGCAGGCGGTGCGCATGCTCTCGTCACGGAACAAGATCGGAGACTCCGTGACTTTCA 28338 | ||||| ||||| ||||| || ||||| || | | |||||| || || || || |||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 28339 CGTCAGTGGTGAACTCGAAGAGGGTGCGGGCGTCTTCTTCGTACTGCTTGCCCCAGGCCA 28398 || | | ||||| || || ||||| | |||||| | |||||||| || |||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 28399 GCGCCTTGGCGTTAACCTCTGGCGCTACACCGGTGCATACCTCGGCGAGCAAGGTGTGGA 28458 | || || |||||||| || || || || |||||||| ||||| || |||| |||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 28459 AGTAGGACATTTTCATGTCTGTCCATTTGCTGCCAGATCGAGGCTTGGAAATGACGTTGT 28518 ||||||||||||||||||| | ||| || | || || || || || | || ||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 28519 GAGCGTCAGAGGCAGTAATAACTCCGAGCCTTAATTTGGCCCATGCTTCATCACCTTGCT 28578 || | || || || || || || ||||||| ||||||| ||| || ||||| || || | Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 28579 CTACGGTGGACACATCTATGCC 28600 | || | |||||| || || Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq408179 Length=355 Score = 286 bits (316), Expect = 1e-72 Identities = 275/353 (78%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 3453 GGTTATCCCGGCTGGATGGCGCAGAACTGGACCTACATTCCTCGCGAACTACCCGGCGGT 3512 || ||||| ||||||||| ||||||| ||||| | || || || || |||||||||| Sbjct 2 GGGTATCCTGGCTGGATGCCGCAGAAATGGACATGGATACCCCGTGAGTTACCCGGCGGG 61 Query 3513 CGACCTTCATTTATCCATGTATTCGAACCGATGGAGGATGGACAGACCCGTGGGGCCAAT 3572 || | || | || || || || ||||| |||||| || |||| || || || ||| Sbjct 62 CGCGCCTCGGTCATTCACGTTTTTGAACCCGGGGAGGACGGGCAGAATCGCGGTGCAAAT 121 Query 3573 GCGTTTTACAGCGTGATGGAGCAGATGAAAATGCTCGATACCCTGCAAAATACCCAGCTC 3632 | ||||||||||||||||||||||||||| |||||||| || ||||| || || ||||| Sbjct 122 GTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTCGACACGCTGCAGAACACGCAGCTG 181 Query 3633 CAGAGCGCGATAGTGAAGGCTATGTATGCCGCTACCATCGAGAGTGAACTGGATACCCAA 3692 |||||||| || |||||||| ||||||||||| ||||| |||||||| |||||||| || Sbjct 182 CAGAGCGCCATTGTGAAGGCGATGTATGCCGCCACCATTGAGAGTGAGCTGGATACGCAG 241 Query 3693 TCGGCGATGGACTTTATTCTCGGCGCGGATAATAAAGAGCAGCAGAGCAAACTTACGGGC 3752 || |||||||| |||||||| |||||| | | | | ||||||| | | || || ||| Sbjct 242 TCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAGGAGCAGCGGGAAAGGCTGACCGGC 301 Query 3753 TGGCTCGGTGAAATGGCGTCCTATTACTCAGCTGCGCCTGTTCGCCTGGGTGG 3805 ||| | |||||||| || | |||||| | || ||||| || || ||||| || Sbjct 302 TGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCGCCGGTCCGGCTGGGAGG 354 >seq243231 Length=365 Score = 136 bits (150), Expect = 1e-27 Identities = 170/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 39555 CGCAATATTTTCGTCGTCGGCGATCTGCATGGGTGCTACACGCTGCTGATGAATGAACTC 39614 || ||||||| || || ||||||||||| || ||||||||| |||||||| |||| Sbjct 133 CGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTGATGAACAAACTG 192 Query 39615 GAAAAGGTTTCGTTCGACCCTGCGTGTGATTTGCTGATTTCGGTTGGAGACCTTGTTGAC 39674 || | | || |||||| || |||| || ||||| || || | ||||| Sbjct 193 GATACGATTGGATTCGACAACAAAAAAGACCTGCTTATCTCGGTGGGCGATTTGGTTGAT 252 Query 39675 CGCGGCGCGGAAAACGTCGAGTGCCTGGAGCTGATTACTATGCCTTGGTTCCGGGCTGTG 39734 || || || || ||||| || |||||||| | || || | || |||||| | ||||| Sbjct 253 CGTGGTGCAGAGAACGTTGAATGCCTGGAATTAATCACATTCCCCTGGTTCAGAGCTGTA 312 Query 39735 CGAGGTAACCATGAGCAGATGATGATTGATGGGCTATCGGAGTATGGAAACGT 39787 || || ||||||||||| |||||||||||||| |||| ||| ||||||||| Sbjct 313 CGTGGAAACCATGAGCAAATGATGATTGATGGCTTATCAGAGCGTGGAAACGT 365 >seq389875 Length=300 Score = 122 bits (134), Expect = 3e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 2647 GAACTGGATGCCGCGCGCGCTGCGTTACATGACCTGATGATGGGAAAGCGCGTGGCGACG 2706 ||||| | || || || || || | ||||||||||||| || || || ||||| || Sbjct 220 GAACTTGCCGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACA 161 Query 2707 GTACAGAAAGACGGTCGAAGAGTGGAATTTACAGCTACCTCAGTCACCGATCTCAAAAAG 2766 |||||||||||||| ||||| ||||| ||||| || || || || | || || ||||| Sbjct 160 GTACAGAAAGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAA 101 Query 2767 TATATTGCTGACCTTGAATCTCAGGTTGGTACCACATCACGACGCCAGGGGCCTGCAAGG 2826 |||||||| || || ||| ||| || | ||| |||||| ||| |||||| | Sbjct 100 TATATTGCAGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGA 41 Query 2827 TTTTACGTATGAAAA 2841 ||||| ||||||||| Sbjct 40 TTTTATGTATGAAAA 26 >seq404959 Length=455 Score = 96.9 bits (106), Expect = 1e-15 Identities = 85/105 (81%), Gaps = 1/105 (1%) Strand=Plus/Minus Query 22804 GTAAAACCGCCG-CAAGTCGTATGCAAGAACGTGCGGCGGCAGGCTGGCGTTCGTTCGAT 22862 ||| | |||| | || |||||||||| |||||||| ||||| |||||| | | | |||| Sbjct 386 GTAGAGCCGCAGACACGTCGTATGCAGGAACGTGCTGCGGCTGGCTGGTGAACTTCCGAT 327 Query 22863 AGTGCGAGTATTGAATGATTTCCAGCCGCTGCGGATTCTACATAT 22907 |||||| || ||||||||||||||| ||| | |||| ||||||| Sbjct 326 AGTGCGGGTGTTGAATGATTTCCAGTTGCTACCGATTTTACATAT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146672776524736