Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq89651 174 2e-37 seq359378 147 3e-29 seq238798 98.7 2e-14 seq109713 87.8 3e-11 >seq89651 Length=228 Score = 174 bits (192), Expect = 2e-37 Identities = 164/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 1485505 GCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564 |||||| ||||||| |||||| ||| | || |||||||| ||||||||||| || | | Sbjct 1 GCGTGCTTGGCCAGCTCGCCGGGCAGCAGGAGCCGCACGGCCGTCTGGATCTCCCGCGAG 60 Query 1485565 CCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCG 1485624 ||| ||| ||||||||| | |||||||||| ||||||| | ||||||| ||| Sbjct 61 GTGATGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGCGAGGCCTCGCCGGCGATGCGCTCG 120 Query 1485625 ATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCG 1485684 | ||||||||||| || ||||||||||| ||| | ||| ||||||||| |||| Sbjct 121 AAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCG 180 Query 1485685 GGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 |||||||||||||| ||||||||||| || Sbjct 181 GGGTGCACCTGCTTCAGCACCTTGTACAC 209 >seq359378 Length=9342 Score = 147 bits (162), Expect = 3e-29 Identities = 143/184 (78%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| |||||||||||||||||| ||||||| || || | | Sbjct 9156 TGTACTTGGTGACGGCCTTGGTGCCCTCTGAGACGGCGTGCTTGGCCAGCTCTCCCGGGA 9215 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||| || ||||| ||||| |||| | ||| ||| ||||||||| Sbjct 9216 GCAGCAGGCGCACAGCCGTCTGAATCTCCCGGGAGGTGATGGTGGAGCGCTTGTTGTAAT 9275 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||||||| ||| || ||||||| || | ||||| ||||| || ||||||| Sbjct 9276 GGGCCAGGCGGGAGGCTTCTCCAGCGATGCGCTCAAAGATGTCATTGACGAAGGAGTTCA 9335 Query 1485650 TGAT 1485653 |||| Sbjct 9336 TGAT 9339 >seq238798 Length=4573 Score = 98.7 bits (108), Expect = 2e-14 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 1485505 GCGTGCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTG 1485564 |||||| ||||||| |||||| ||| | || | ||| || ||||| | ||| ||| || Sbjct 2496 GCGTGCTTGGCCAGCTCGCCGGGCAGCAGGAGCCTCACAGCCGTCTGCACCTCACGGCTG 2437 Query 1485565 CCGATCGTGTTGCGCTTGTTAGTGC-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTC 1485623 ||| ||| ||| | ||| || | | |||||||| |||||| | | | | || || Sbjct 2436 GTGATGGTGGAGCGGTGGTT-GTACTGGGCCAGGCGTGAGGCCTCTGAGGCCAGCCGCTC 2378 Query 1485624 GATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTC 1485683 || || |||||||| || ||||||||||| ||| | || ||||||||| ||| Sbjct 2377 GAAGATATCGTTGACGAAGGAGTTCATGATGCTCATGGCCTTAGAGGAGATGCCAGTGTC 2318 Query 1485684 GGGGTGCACCTGC 1485696 |||||||||||| Sbjct 2317 TGGGTGCACCTGC 2305 >seq109713 Length=16520 Score = 87.8 bits (96), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 796303 ACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGG 796362 |||||||| || ||||| ||||||||||||||||| |||||||||| ||| || ||| Sbjct 371 ACCTCCTCCGCCGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGATGTCGTGG 312 Query 796363 TAGCGGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 || |||||||||| | || |||| |||||| || || || |||| || Sbjct 311 TACTGGATGGGGAAGATGACGCAGCGGCGGGGGTTGTCCCGCGGCGGCGGTTC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7862482675753941