Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq394259 123 2e-23 seq380048 120 3e-22 seq191736 102 8e-17 >seq394259 Length=215 Score = 123 bits (136), Expect = 2e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| ||| | || |||| |||||| ||||| || |||||||||||| Sbjct 4 TCTTCCAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 63 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| ||||| ||||||| || || | ||||| | Sbjct 64 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATG 123 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| ||||| || || || || ||||||||| Sbjct 124 GTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 159 >seq380048 Length=211 Score = 120 bits (132), Expect = 3e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || |||| |||||| || || || |||||||||||| Sbjct 208 TCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCCTTG 149 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||||| ||||| ||||||| || || | ||||| | Sbjct 148 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 89 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || ||||| ||||| || || ||||| ||||||||| Sbjct 88 GTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCATG 53 >seq191736 Length=12127 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 ||||||| | | | ||||| || || || | |||||||||||||||||||| || Sbjct 1952 CTCATCCTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCC 2011 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969 || ||||| ||||||||||| | |||||| | ||| |||||||||||||||||| ||| Sbjct 2012 CAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCC 2071 Query 148970 AGTTTC 148975 || || Sbjct 2072 GGTCTC 2077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480366674283560