Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq354460 663 0.0 seq243231 100 1e-16 >seq354460 Length=442 Score = 663 bits (734), Expect = 0.0 Identities = 412/442 (93%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 1985 CCTGGGCCATGTAAGCTGATTTTATGGCCTCGAAACCACCGAGCCGGAATTTCATGAAAT 2044 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 2045 CCCGGGAGGTAAACGGACATTTCAGCTCAAGGCCGTTGCCGTCACTGCATAATCCATCCG 2104 |||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| | Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 2105 GAGAGCAGGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 2164 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 2165 CGCCGGAAGTAAACTCAAACAGGGCTCTGGCGTCGTTCTCGTACTGTTTTCCCCATGCCA 2224 |||||||||| || |||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 2225 GGGCTTTGGCGTTAACTTCCGGGGCCACACCCGTGCAGACCTCAGCCAGCAGGGTGTGGA 2284 | ||||| |||||||||||||| ||||| || ||||| |||||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 2285 AGTAGGACATTTTCATGTCAGGCCATTTCTTTCCGGAGCGGGGTTTGGCTATCACGTTGT 2344 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 2345 GAACTTCTGAAGCTGTGATGCCCCCGAGCCGTAATTTTTGCCATGCATAATCTCCCTGCT 2404 ||||||||||||| |||||| | |||||||||||||| ||||| |||| ||| ||||| | Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 2405 CGACACCTCTCACGTCGATCCC 2426 ||||| ||||||| |||||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq243231 Length=365 Score = 100 bits (110), Expect = 1e-16 Identities = 77/90 (86%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 19129 ACAGTCAGAAAATACATTGATGATAAAGATGCGAAAAAGCACGCCGTCGTCAATGGCGTC 19188 || |||||||||||| ||||||||||||| | ||||| ||||||| ||||||| | ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 19189 CTTATGGTTCATCGCGGATGG-GGTAAAGA 19217 || || ||||||||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199276887372940