Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq403274 118 3e-23 seq134060 118 3e-23 seq31912 100 9e-18 seq31909 100 9e-18 seq16393 98.7 3e-17 seq31907 96.9 1e-16 seq31913 87.8 6e-14 seq278791 86.0 2e-13 seq31914 86.0 2e-13 seq161503 78.8 3e-11 >seq403274 Length=103 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||| Sbjct 7 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGACCTAAAGGTCCCTGGTTCAAC 66 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 67 CCCGGGCTTCAGC 79 >seq134060 Length=50177 Score = 118 bits (130), Expect = 3e-23 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct 21944 GGCTGAAGTAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAG 22003 Query 2828 CCCGGGCTTCAGC 2840 ||||||||||||| Sbjct 22004 CCCGGGCTTCAGC 22016 >seq31912 Length=552 Score = 100 bits (110), Expect = 9e-18 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| | Sbjct 381 GGCTGAAGCAGCTCAGCTGGCAGAGCATTAGAATGAAGATCTAAAGGTCCCTGGTTCAGC 440 Query 2828 CCCGGGCTTC 2837 || ||||||| Sbjct 441 CCTGGGCTTC 450 >seq31909 Length=650 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||| | Sbjct 105 GGCTGAAGCAGCTCAGCTGGCAGAGCATTAGAATGAAGATCTAAAGGTCCCTGGTTCAGC 46 Query 2828 CCCGGGCTTCAGC 2840 || ||||||| || Sbjct 45 CCTGGGCTTCTGC 33 >seq16393 Length=21145 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 19063 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 19004 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 19003 CCGGGTTTCGGC 18992 >seq31907 Length=338 Score = 96.9 bits (106), Expect = 1e-16 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| ||| ||||||||| | ||||||||||||||||||||||||| | Sbjct 325 GGCTGAAGCAGCTCAGCTGGCAGAGCATTACAATGAAGATCTAAAGGTCCCTGGTTCAGC 266 Query 2828 CCCGGGCTTCAGC 2840 || ||||||| || Sbjct 265 CCTGGGCTTCTGC 253 >seq31913 Length=372 Score = 87.8 bits (96), Expect = 6e-14 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| ||| ||||||| | | |||||||||||||||||| |||||| | Sbjct 263 GGCTGAAGCAGCTCAGCTGGCAGAGCATGACAATGAAGATCTAAAGGTCCCGGGTTCAGC 322 Query 2828 CCCGGGCTTCAGC 2840 || ||||||| || Sbjct 323 CCTGGGCTTCTGC 335 >seq278791 Length=634 Score = 86.0 bits (94), Expect = 2e-13 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||| |||||||||| || ||||||||||||||||||||| |||||||| | | Sbjct 130 GCCGAAATAGCCCAGTTGGGAGGGCGTTAGACTGAAGATCTAAAGGTTCCTGGTTCGATC 71 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 70 CCGGGTTTCGGC 59 >seq31914 Length=102 Score = 86.0 bits (94), Expect = 2e-13 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 |||||||| ||||||| || ||||||||| | |||||||||||||||||||||||| | Sbjct 28 GGCTGAAGCAGCTCAGCTGTCAGAGCATTACAAAGAAGATCTAAAGGTCCCTGGTTCAGC 87 Query 2828 CCCGGGCTTC 2837 || ||||||| Sbjct 88 CCTGGGCTTC 97 >seq161503 Length=477 Score = 78.8 bits (86), Expect = 3e-11 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 || ||| |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 53 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15761983089255