Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq89651 167 3e-35 seq359378 114 2e-19 seq109713 86.0 9e-11 >seq89651 Length=228 Score = 167 bits (184), Expect = 3e-35 Identities = 165/212 (78%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 206 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 153 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 ||||||||||| || ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 152 GGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCGCGC 93 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| || |||||||||| ||| ||| | |||| ||||||||||| |||||||| Sbjct 92 CTGGCGCACTACAACAAGCGCTCCACCATCACCTCGCGGGAGATCCAGACGGCCGTGCGG 33 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGC 725125 || | ||| |||||| ||||||| |||||| Sbjct 32 CTCCTGCTGCCCGGCGAGCTGGCCAAGCACGC 1 >seq359378 Length=9342 Score = 114 bits (126), Expect = 2e-19 Identities = 125/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||||| || ||||| ||||| | || ||||||| || ||| |||||| Sbjct 9339 ATCATGAACTCCTTCGTCAATGACATCTTTGAGCGCATCGCTGGAGAAGCCTCCCGCCTG 9280 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 || | | |||||||||| ||| ||| | | || ||||| ||||| || ||||||||| Sbjct 9279 GCCCATTACAACAAGCGCTCCACCATCACCTCCCGGGAGATTCAGACGGCTGTGCGCCTG 9220 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | | | || || ||||||| |||||||||||| |||||||||| Sbjct 9219 CTGCTCCCGGGAGAGCTGGCCAAGCACGCCGTCTCAGAGGGCACCA 9174 >seq109713 Length=16520 Score = 86.0 bits (94), Expect = 9e-11 Identities = 88/114 (77%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || |||| || ||| || ||||| ||||| ||| | |||||||||| ||||| Sbjct 259 GAACCGCCGCCGCGGGACAACCCCCGCCGCTGCGTCATCTTCCCCATCCAGTACCACGAC 318 Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGT 1455829 || ||| | |||||| || ||||||||||||||||| ||||| || |||||||| Sbjct 319 ATCTGGCAGATGTAC-AAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGT 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7129062608489878