Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq403192 767 0.0 seq354460 735 0.0 seq237293 693 0.0 >seq403192 Length=430 Score = 767 bits (850), Expect = 0.0 Identities = 428/430 (99%), Gaps = 0/430 (0%) Strand=Plus/Plus Query 30141 AGCTCAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 30200 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 AGCTTAGGTGAGAACATCCCTGCCTGAACATGAGAAAAAACAGGGTACTCATACTCACTT 60 Query 30201 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 30260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 CTAAGTGACGGCTGCATACTAACCGCTTCATACATCTCGTAGATTTCTCTGGCGATTGAA 120 Query 30261 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGCAAGCAATGCGGCGTTATAAGCA 30320 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 121 GGGCTAAATTCTTCAACGCTAACTTTGAGAATTTTTGTAAGCAATGCGGCGTTATAAGCA 180 Query 30321 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 30380 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 TTTAATGCATTGATGCCATTAAATAAAGCACCAACGCCTGACTGCCCCATCCCCATCTTG 240 Query 30381 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCAtttttctttttttCATAAATTGCTTTA 30440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 TCTGCGACAGATTCCTGGGATAAGCCAAGTTCATTTTTCTTTTTTTCATAAATTGCTTTA 300 Query 30441 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGT 30500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AGGCGACGTGCGTCCTCAAGCTGCTCTTGTGTTAATGGTTTCTTTTTTGTGCTCATACGT 360 Query 30501 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 30560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TAAATCTATCACCGCAAGGGATAAATATCTAACACCGTGCGTGTTGACTATTTTACCTCT 420 Query 30561 GGCGGTGATA 30570 |||||||||| Sbjct 421 GGCGGTGATA 430 >seq354460 Length=442 Score = 735 bits (814), Expect = 0.0 Identities = 428/442 (97%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 24632 CCTGGGCCATGTAAGCCGACTTTATGGCCTCGAAACCACCGAGCCGGAATTTCATGAAAT 24691 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 24692 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 24751 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 24752 GAGAGCAGGCGGTGCGCATATTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 24811 ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 24812 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 24871 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 24872 GCGCCTTAGCATTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCCAGCAGGGTGTGGA 24931 | || ||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 24932 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGAGCGGGGCTTTGCTATCACGTTGT 24991 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 24992 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCATGCATCATCCCCCTGTT 25051 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 25052 CGACAGCTCTCACGTCGATCCC 25073 ||||||||||||| |||||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 693 bits (768), Expect = 0.0 Identities = 399/409 (98%), Gaps = 0/409 (0%) Strand=Plus/Minus Query 33067 GAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGGCGGTATATGGAGTTAAAAGATGA 33126 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 409 GAGTGTCGCCAGAGTGCCGCGATGAAACGGGTATTGGAGGTATATGGAGTTAAAAGATGA 350 Query 33127 CCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGG 33186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 349 CCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATTTGGG 290 Query 33187 GGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAA 33246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 289 GGAGAGGGAAGTCATGAAAAAACTAACCTTTGAAATTCGATCTCCAGCACATCAGCAAAA 230 Query 33247 CGCTATTCACGCAGTACAGCAAATTCTTCCAGACCCAACCAAACCAATCGTAGTAACCAT 33306 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 229 CGCTATTCACGCAGTACAGCAAATCCTTCCAGACCCAACCAAACCAATCGTAGTAACCAT 170 Query 33307 TCAGGAACGCAACCGCAGCTTAGACCAAAACCGAAAGCTTTGGGCTTGCCTTGGTGACGT 33366 ||||||||||||||||||||||||||||||||| ||||| ||||| | | | |||| ||| Sbjct 169 TCAGGAACGCAACCGCAGCTTAGACCAAAACCGGAAGCTATGGGCCTTCTTAGGTGGCGT 110 Query 33367 CTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTT 33426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 109 CTCTCGTCAGGTTGAATGGCATGGTCGCTGGCTGGATGCAGAAAGCTGGAAGTGTGTGTT 50 Query 33427 TACCGCAGCATTAAAGCAGCAGGACGTTGTTCCTAACCTTGCCGGGAAT 33475 |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 49 TACCGCAGCATTAAAGCAGCAGGATGTTGTTCCTAACCTTGCCGGGAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121986633685378