Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq354460 717 0.0 seq237293 118 4e-22 seq243231 91.5 5e-14 >seq354460 Length=442 Score = 717 bits (794), Expect = 0.0 Identities = 424/442 (96%), Gaps = 0/442 (0%) Strand=Plus/Minus Query 4896 CCTGGGCCATGTAAGCCGATTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 4955 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 4956 CCCGGGAGGTAAACGGGCATTTCAGCTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 5015 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 5016 GAGAGCAGGCGGTGCGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 5075 ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 5076 CGCCGGAAGTGAACTCAAAGAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 5135 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 5136 GAGCCTTAGCGTTAACTTCCGGAGCCACACCGGTGCAAACCTCAGCCAGCAGGGTGTGGA 5195 | || ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 5196 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCTGATCGGGGTTTTGCTATTACGTTGT 5255 |||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 5256 GAATTTCTGAAGCTGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCTCCCTGTT 5315 ||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 5316 CGACAGCTCTCACGTCGATCCC 5337 ||||||||||||| |||||||| Sbjct 22 CGACAGCTCTCACATCGATCCC 1 >seq237293 Length=409 Score = 118 bits (130), Expect = 4e-22 Identities = 70/73 (96%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 16608 ATGACCATCTACATCACTGAGCTTGTAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 16667 |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 353 ATGACCATCTACATTACTGAGCTAATAACAGGCCTGCTGGTAATCGCAGGCCTTTTTATT 294 Query 16668 TGGGGGAGAGGGA 16680 ||||||||||||| Sbjct 293 TGGGGGAGAGGGA 281 >seq243231 Length=365 Score = 91.5 bits (100), Expect = 5e-14 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 20709 ACGGTCAGAAAATACACTGGCGATAAAGAAGGGAAAAGACACGCTATCGTCAACGGTGTT 20768 ||||||||||||||| || |||||||| ||||||| ||||| |||||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 20769 CTTATGGTTCACCGCGGATGG-GGTAAAGA 20797 || || ||||| ||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183337789861842