Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq319042 214 5e-50 seq12013 197 4e-45 seq380048 105 2e-17 seq201640 95.1 4e-14 seq166321 93.3 1e-13 seq466975 91.5 4e-13 seq456413 86.0 2e-11 >seq319042 Length=6524 Score = 214 bits (236), Expect = 5e-50 Identities = 381/549 (69%), Gaps = 8/549 (1%) Strand=Plus/Minus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| ||||||| ||||| | || ||||| || |||||||| ||| | || || Sbjct 4824 GAAAGGAATGTTCTTATCTTTGACCTTGGAGGTGGCACCTTTGATGTGTCAATTCTGACT 4765 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 ||||||| || || ||||| || ||| | ||||| ||||| || || | ||||||||| Sbjct 4764 ATTGAAGATGGCATCTTTGAGGTGAAATCCACTGCAGGTGACACTCACTTGGGTGGAGAA 4705 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938 || ||||| || || | || || || || ||||| ||||| ||||| || | Sbjct 4704 GACTTTGACAACCGCATGGTCAACCACTTCATTGCTGAATTCAAGCG-CAAGCACAAGAA 4646 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || |||||| | |||||||| | ||||| || || ||||| || Sbjct 4645 GGACATCAGCGAGAACAAGAGAGCAGTTCGTCGCCTCCGCACTGCATGCGAGCGTGCAAA 4586 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 |||| | | || |||| || || || |||||||||||||||||| ||| || | Sbjct 4585 GCGTACTCTGTCTTCTAGCACGCAGGCCAGTATTGAAATTGATTCTCTCTATGAGGGTAT 4526 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 || |||| |||| ||||| | ||||| |||||||| || | | || || || Sbjct 4525 TGACTTCTACACATCCATTACCAGAGCTCGCTTTGAAGA--GCTGAACGCTGACCTGTTC 4468 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 | | || |||||||||||||||| | | ||||| ||| | |||| ||| Sbjct 4467 CGTGGCACCCTGGATCCTGTGGAAAAGGCCCTGCGGGATGCCAAACTCGACAAATCGCAG 4408 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||| | || | |||||||| ||||| ||||| ||||| |||| | | || Sbjct 4407 ATCCATGACATCGTGCTGGTTGGTGGGTCTACTCGTATCCCAAAGATTCAGAAACTGCTG 4348 Query 350237 TCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGC 350295 || || || ||||||||||| | | ||| | || ||||| ||||||||||| || Sbjct 4347 CAGGATTTCTTCAATGGCAAAGAGCTGAACAAGAGC-ATCAATCCTGATGAAGCTGTGGC 4289 Query 350296 ATATGGTGC 350304 |||||||| Sbjct 4288 TTATGGTGC 4280 Score = 127 bits (140), Expect = 6e-24 Identities = 352/532 (66%), Gaps = 6/532 (1%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAAT-TCTTTGCCATTA 183320 |||||||||| || ||||||||||| || || || | | | | | ||||||||||| Sbjct 4278 CTGCACCATAAGCCACAGCTTCATCAGGATTGAT-GCTCTTGTTCAGCTCTTTGCCATTG 4336 Query 183321 AA-AAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATAC 183379 || |||| ||| | ||| || ||||| ||||| || | ||| || ||||| || | || Sbjct 4337 AAGAAATCCTGCA-GCAGTTTCTGAATCTTTGGGATACGAGTAGACCCACCAACCAGCAC 4395 Query 183380 TACTTCATCGATATTACTTTTA-CTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438 | |||| ||| | ||| | | |||| | ||| | | ||||| ||||| | Sbjct 4396 GATGTCATGGATCTGCGATTTGTCGAGTTTG-GCATCCCGCAGGGCCTTTTCCACAGGAT 4454 Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498 ||| || | || | || | |||||| || | ||||| || | |||| Sbjct 4455 CCAGGGTGCCACGGAACAGGTCAGCGTTCAGCTCTTCAAAGCGAGCTCTGGTAATGGATG 4514 Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558 | ||||||||||| | ||| | |||||||||||||| | || || || | Sbjct 4515 TGTAGAAGTCAATACCCTCATAGAGAGAATCAATTTCAATACTGGCCTGCGTGCTAGAAG 4574 Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTAT 183618 | | || | || || || || ||||| || | || ||||| | || ||| || | Sbjct 4575 ACAGAGTACGCTTTGCACGCTCGCATGCAGTGCGGAGGCGACGAACTGCTCTCTTGTTCT 4634 Query 183619 CTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTG 183678 | | || || | || || || | || ||||||| ||| || || | | | | Sbjct 4635 CGCTGATGTCCTTCTTGTGCTTGCGCTTGAATTCAGCAATGAAGTGGTTGACCATGCGGT 4694 Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 | ||||| ||||| ||||| || || || || || ||||| | ||| || ||||| || | Sbjct 4695 TGTCAAAGTCTTCTCCACCCAAGTGAGTGTCACCTGCAGTGGATTTCACCTCAAAGATGC 4754 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 | ||||||||| | | |||||| |||||||| || ||||| || | ||||| Sbjct 4755 CATCTTCAATAGTCAGAATTGACACATCAAAGGTGCCACCTCCAAGGTCAAA 4806 Score = 114 bits (126), Expect = 4e-20 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 349598 ACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCA 349657 || || ||| | ||||| | || |||||||||||||| ||||| | |||||| || Sbjct 5086 ACTGTTACTAACGCTGTAGTGACCGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCT 5027 Query 349658 ACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACT 349717 |||||||||||||| | |||||| ||| | ||||| || |||| || ||||| || || Sbjct 5026 ACAAAAGATGCTGGAACCATTGCAGGGCTCAATGTACTGCGAATTATCAATGAGCCAACA 4967 Query 349718 GCTGCAGCAATTGCATATGGGCTTGATAAAA 349748 ||||| ||||| || ||||| || || |||| Sbjct 4966 GCTGCTGCAATAGCCTATGGCCTGGACAAAA 4936 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/157 (73%), Gaps = 5/157 (3%) Strand=Plus/Minus Query 349433 CAATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATT 349492 || |||||| | || || | ||||| ||||| || || || | || | ||||| Sbjct 5342 CAGTCTGATATGAAGCACTGGCCTTTCACTGTGGTG---AATGATGCTGGCAGACCAAAA 5286 Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAAT 349551 | |||| || || ||||| || | ||| | || ||||| ||||||||||| || || Sbjct 5285 GTCCAGGTGGAGTACAAAGGCGAG-ACAAAGAGCTTCTACCCAGAAGAAATTTCTTCCAT 5227 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATAT 349588 ||||||| ||||||||||||||||| ||||||||| Sbjct 5226 GGTTTTAACCAAAATGAAGGAAATTGCAGAAGCATAT 5190 >seq12013 Length=10997 Score = 197 bits (218), Expect = 4e-45 Identities = 797/1241 (64%), Gaps = 21/1241 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| || || || || || || || || | ||| | || ||| Sbjct 10397 GCAATCGGCATCGACTTGGGCACCACGTACTCCTGCGTGGGTGTCTTTCAGCATGGCAAA 10338 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 || || || || || || || || || ||| | || || || || || || || ||| Sbjct 10337 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACACCCAGCTATGTGGCCTTCACC 10278 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||||| | || |||||| |||| || || || | ||| || || | || Sbjct 10277 GATACAGAGCGCCTCATCGGTGATGCTGCCAAGAACCAGGTGGCTATGAACCCTACCAAC 10218 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCT 349438 || | || ||||| ||||| || || || | || | | |||| | || ||| Sbjct 10217 ACCATCTTCGATGCCAAGCGTCTCATCGGCCGCAGGTATGATGACCCCACGGTGCAGTCT 10158 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 || | || || | || || ||| || || || |||| || || | | | Sbjct 10157 GACATGAAGCACTGGCCCTTCCGTGTGGTG---AACGAGGGTGGCAAGCCCAAGGTGCAA 10101 Query 349499 GTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 || || || || ||||| | || || || || || || || || || ||||| | Sbjct 10100 GTGGAGTACAAGGGTGAGATGAAGACC-TTCTTCCCAGAGGAGATCAGCTCCATGGTCCT 10042 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || |||||||| |||||||| || ||| | || | || ||||||| || Sbjct 10041 TACCAAGATGAAGGAGATTGCTGAGGCCTATCTGGGGCGCAAGGTGCAGAATGCTGTCAT 9982 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || || || || || || ||||| ||||||| || || ||||||||||||| ||| Sbjct 9981 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 9922 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 | || | ||||| | | || || || || ||||| || || || || || ||||| Sbjct 9921 CACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGCAGCTGCTATAGCCTATGG 9862 Query 349738 GCTTGATAAAATGAGTGACCA------AGaaaaaaaTATTCTTATTTTTGATTTAGGTGG 349791 | || || | | || || ||| || ||| | || || |||||||| || || Sbjct 9861 TTTGGACAAGAAGGGTACCCGGGCCGGAGAGAAGAATGTGCTCATCTTTGATTTGGGAGG 9802 Query 349792 TGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAAC 349851 || ||||||||||| || | || || |||| || || || ||||| || || | || Sbjct 9801 GGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTTGAGGTGAAGTCCAC 9742 Query 349852 TGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT 349911 |||||||| || || || ||||| || || ||||| || || | || |||||||| Sbjct 9741 AGCTGGTGACACCCACCTGGGTGGGGAGGACTTTGACAACCGCATGGTGAACCATTTTGT 9682 Query 349912 TAAAGAATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 ||||||| |||||| |||| || || |||| | || |||| || | | Sbjct 9681 GGAAGAATTCAAGCGT-AAGCACAAGCGCGACATTGCCGGCAACAAGCGAGCGGTGAGGC 9623 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTC-CTTATCATCTACTACCCAAACCTCT 350029 | || | || ||||| || | || ||||| | || | | ||| | || ||| | Sbjct 9622 GACTGCGTACGGCGTGCGAGAGGGCGAAGCGCACTCTCAGC-TCTTCCACGCAAGCTAGC 9564 Query 350030 ATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGG 350089 ||||| || || || || || |||| || |||| | || ||||| ||||| || Sbjct 9563 ATTGAGATCGACTCCCTCTACGAGGGCATTGACTTCTACACCTCCATTACTCGTGCCCGC 9504 Query 350090 TTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTA 350149 ||||| || | | ||||| || | | || |||| || ||||| |||| || Sbjct 9503 TTTGAGGAGCTCAATGCTGATCTCTTCCGTGGCACCCTGGAGCCAGTGGAGAAAGCCTTG 9444 Query 350150 AAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACA 350209 ||||| || | ||| ||||| | || | || | || ||||| ||||| Sbjct 9443 CGTGATGCCAAGCTAGACAAGGGCCAGATCCAGGAGATCGTGCTGGTGGGTGGCTCTACC 9384 Query 350210 CGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAG 350268 ||||| || || | ||| || | ||| || || || ||||||||||| | | | || Sbjct 9383 CGTATCCCCAAGATCCAAAAGCTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAACAAG 9324 Query 350269 ATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATC 350328 | | || || || ||||| |||||||| ||||||||||| || || ||| | || | Sbjct 9323 AGC-ATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCCGTGCAAGCAGCAATCCTCAT 9265 Query 350329 TGGAAATAAGAGTTCTAAAAT-TG-ATGATCTATTACTACTAGATGTAACTCCACTTTCG 350386 ||| | | ||| | ||| || | ||||| | || | ||||| || || || || Sbjct 9264 GGGAGACA--AGTCAGAGAATGTGCAGGATCTCCTGCTGTTGGATGTCACCCCTCTGTCC 9207 Query 350387 CTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTAT 350427 || || | || || |||||| ||| ||||| | ||| || Sbjct 9206 CTGGGCATCGAGACAGCTGGTGGAGTGATGACCGCTCTCAT 9166 >seq380048 Length=211 Score = 105 bits (116), Expect = 2e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 140580 CCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCT 140639 |||||||| || || || ||||||||||| || | ||||||||||| ||||| ||||| Sbjct 211 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCTTCC 152 Query 140640 TTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699 || ||||| || || || || || || ||||| | ||| || ||||| || || || Sbjct 151 TTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTG 92 Query 140700 ACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | ||||| || || || || || || || |||||||| Sbjct 91 ATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 54 >seq201640 Length=7843 Score = 95.1 bits (104), Expect = 4e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | ||| | |||||||| ||||| || || || ||| | || || || | Sbjct 5717 ATTGATGAGATTGTTCTTGTTGGTGGCTCTACTCGCATCCCCAAAATACAGCAACTAGTT 5658 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || ||||| ||||| |||||| | |||||||||||||| ||||| || Sbjct 5657 AAAGAGTTCTTCAATGGGAAAGAGCCTTCTCGTGGCATTAATCCAGATGAGGCTGTAGCC 5598 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 ||||| || ||||| ||||| Sbjct 5597 TATGGCGCAGCTGTCCAGGC 5578 Score = 86.0 bits (94), Expect = 2e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| ||||||| |||||||| || |||||||| |||||| || |||||||||| Sbjct 6674 ATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACAAAAGATG 6615 Query 349668 CTGGCAGCATTGCGGGGTTA 349687 |||| | ||||| |||||| Sbjct 6614 CTGGTACTATTGCTGGGTTA 6595 >seq166321 Length=11431 Score = 93.3 bits (102), Expect = 1e-13 Identities = 74/89 (83%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 140548 CTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGA 140607 ||||||||||||| || ||||| | ||| || |||||||| || || || |||||||| | Sbjct 10508 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 10567 Query 140608 TTAGACGTTGCTGATCAGGAGGAATTCCT 140636 | || || ||||||||||||||||| ||| Sbjct 10568 TCAGTCGCTGCTGATCAGGAGGAATGCCT 10596 >seq466975 Length=2860 Score = 91.5 bits (100), Expect = 4e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||||||| ||||||| |||||||| || |||||||| |||||| || |||||||||| Sbjct 2462 ATGCTGTTGTTACTGTGCCAGCCTACTTCAATGATGCTCAGCGTCAGGCTACAAAAGATG 2403 Query 349668 CTGGCAGCATTGCGGGGTTAAATGT 349692 |||| | ||||| ||||| ||||| Sbjct 2402 CTGGTACTATTGCTGGGTTGAATGT 2378 >seq456413 Length=1791 Score = 86.0 bits (94), Expect = 2e-11 Identities = 123/173 (71%), Gaps = 3/173 (2%) Strand=Plus/Minus Query 349715 ACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTT 349774 || ||||| || || || ||||| | || || ||| || || || || || || Sbjct 1661 ACGGCTGCTGCCATCGCTTATGGATTGGACAA---GAGAGAGGGTGAGAAGAACATCCTC 1605 Query 349775 ATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATT 349834 | ||||| || |||||||| ||||||||||| || || || || |||| | ||| | Sbjct 1604 GTGTTTGACTTGGGTGGTGGAACTTTTGATGTCTCCCTCCTCACGATTGACAATGGAGTC 1545 Query 349835 TTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 ||||||||| || ||| ||| || || || || ||||||||||| ||||| Sbjct 1544 TTTGAAGTTGTGGCTACTAATGGCGACACTCACCTGGGTGGAGAAGACTTTGA 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505442095966457