Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq354460 361 2e-95 seq243231 87.8 7e-13 >seq354460 Length=442 Score = 361 bits (400), Expect = 2e-95 Identities = 334/423 (79%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 14310 CCTGGGCCATGTAAGCAGGCTTGATAGCGTCAAAGCCGCCAAGCCGGAACTTCATGAAGT 14369 |||||||||||||||| | ||| || || || || || || ||||||||||||||||| | Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 14370 CGCGGGAAGTGAAGGGGCATTTAAGCTCAAGGCCGTTACCGTCGCTGCATAAACCGTCGG 14429 | ||||| || || |||||||| || ||||||||||| ||||| ||||||||||| |||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 14430 GAGAGCAGGCGGTGCGCATGCTTTCGTCACGAAAAATTATTGGCGTTTCCGAGACGGTAA 14489 ||||||| ||||| ||||| |||||||| ||| | || || || | ||| | || | | Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 14490 CATCCGCGATAAACTCGAAGAGGGCACGGGCATCATCTTCGTATTGCTTTCCCCATGCGA 14549 | | | | || || || |||| | ||| || | ||||| || |||||||| || | Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 14550 GCGACTTAGCGTTAACTTCCGGTGCCACGCCAGTACAAACTTCAGCCAGCAGGGTGTGGA 14609 | | ||||||||||||||||| ||||| || || ||||| ||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 14610 AGTATGACATTTTTGTATCAGGCCATTTGCTGCCGGAACGTGGCTTTGCTATCACATTGT 14669 |||| |||||||| | |||||||| || | ||||| || || ||||||||||| |||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 14670 GAACTTCTGAAGCAGTGATAACACCGAGTCTCAGCTTGTGCCATCCATCATCGCCCTGGT 14729 ||||||||||||| ||||| || ||||| | | |||||||| ||||||| ||||| | Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 14730 CGA 14732 ||| Sbjct 22 CGA 20 >seq243231 Length=365 Score = 87.8 bits (96), Expect = 7e-13 Identities = 74/90 (82%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 26153 ACGGTCAGAAAATACACTGGCGATAAAGAAGGAAAAAGACACGCTATTGTCAACGGTGTT 26212 ||||||||||||||| || |||||||| || |||| ||||| || ||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 26213 CTTATGGTTCATCGCGGATGG-GGTAAAGA 26241 || || ||||||||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 202043738506270