Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_028685.1 Length=62851 Score E Sequences producing significant alignments: (Bits) Value seq354460 376 1e-99 seq243231 91.5 6e-14 >seq354460 Length=442 Score = 376 bits (416), Expect = 1e-99 Identities = 337/423 (80%), Gaps = 0/423 (0%) Strand=Plus/Minus Query 11825 CCTGGGCCATGTAAGCAGGCTTGATAGCGTCAAAGCCGCCAAGCCGGAACTTCATGAAGT 11884 |||||||||||||||| | ||| || || || || || || ||||||||||||||||| | Sbjct 442 CCTGGGCCATGTAAGCTGACTTTATGGCCTCGAAACCACCGAGCCGGAACTTCATGAAAT 383 Query 11885 CGCGGGAAGTAAAGGGGCATTTAAGCTCAAGACCGTTACCGTCACTGCATAAACCATCGG 11944 | ||||| ||||| |||||||| || ||||| ||||| |||||||||||||||||||||| Sbjct 382 CCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCCGTTGCCGTCACTGCATAAACCATCGG 323 Query 11945 GAGAGCAGGCGGTGCGCATGCTTTCGTCACGAAAAATTATGGGTGTTTCCGAGACGGTAA 12004 ||||||| ||||| ||||| |||||||| ||| | || || || | ||| | || | | Sbjct 322 GAGAGCAAGCGGTACGCATACTTTCGTCGCGATAGATGATCGGGGATTCAGTAACATTCA 263 Query 12005 CATCCGCGATAAATTCAAAGAGGGCACGGGCATCATCTTCATATTGCTTTCCCCATGCGA 12064 | | | | |||||||| |||| | ||| || | || || || |||||||| || | Sbjct 262 CGCCGGAAGTGAATTCAAACAGGGTTCTGGCGTCGTTCTCGTACTGTTTTCCCCAGGCCA 203 Query 12065 GCGACTTAGCGTTAACTTCCGGTGCCACGCCAGTACAAACTTCAGCCAGCAGGGTGTGGA 12124 | | ||||||||||||||||| ||||| || || ||||| ||||| ||||||||||||| Sbjct 202 GTGCTTTAGCGTTAACTTCCGGAGCCACCCCGGTGCAAACCTCAGCAAGCAGGGTGTGGA 143 Query 12125 AGTATGACATTTTTGTATCAGGCCATTTGCTGCCGGAACGTGGCTTTGCTATCACATTGT 12184 |||| |||||||| | |||||||| || | ||||| || || ||||||||||| |||| Sbjct 142 AGTAGGACATTTTCATGTCAGGCCACTTCTTTCCGGAGCGGGGTTTTGCTATCACGTTGT 83 Query 12185 GAACTTCTGAAGCAGTGATAACACCGAGTCTCAGCTTGTGCCATCCATCATCGCCCTGGT 12244 ||||||||||||| ||||| || ||||| | | |||||||| ||||||| ||||| | Sbjct 82 GAACTTCTGAAGCGGTGATGACGCCGAGCCGTAATTTGTGCCACGCATCATCCCCCTGTT 23 Query 12245 CGA 12247 ||| Sbjct 22 CGA 20 >seq243231 Length=365 Score = 91.5 bits (100), Expect = 6e-14 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 24491 ACAGTCAGAAAATACATTGGCGATAAAGAAGGGAAAAGACACGCTATCGTCAACGGTGTT 24550 || |||||||||||| ||| |||||||| ||||||| ||||| |||||||||| ||| Sbjct 6 ACGGTCAGAAAATACGTTGATGATAAAGACGGGAAAATGCACGCCATCGTCAACGACGTT 65 Query 24551 CTTATGGTTCACCGCGGATGG-GGTAAAGA 24579 || || ||||| ||||||||| || ||||| Sbjct 66 CTCATCGTTCATCGCGGATGGAGGGAAAGA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199760291249108