Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq243231 100 2e-16 >seq243231 Length=365 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 88299 CATCAATCATCAGCCGCTCATGGTTCCCCATCACTGCCCTGAACCA-GGGCATCTGCAAT 88357 |||||||||||| |||||||||| || || || |||||||| ||| || || | | Sbjct 343 CATCAATCATCATTTGCTCATGGTTTCCACGTACAGCTCTGAACCAGGGGAATGTG-ATT 285 Query 88358 AGTTCCAGACATTCGACATTTTCAGTACCGCGATCGATAAGGTCGCCGACCGATATCAGT 88417 | |||||| ||||| || || || | ||| ||||| | | ||||| ||||| || || Sbjct 284 AATTCCAGGCATTCAACGTTCTCTGCACCACGATCAACCAAATCGCCCACCGAGATAAGC 225 Query 88418 AAATCCTGCGCCGGGTCAAAATCCACACG-ATGGAGTTCGGACATCAGTCTGGTGTAGCA 88476 | || | ||| |||||| || || |||| | |||||| | |||||||| Sbjct 224 AGGTCTTTTTTGTTGTC-GAATCCAATCGTATCCAGTTTGTTCATCAGGTTCGTGTAGCA 166 Query 88477 ACCATGCAGATCACCAACAACCCAGACATTCCTGTATTTGGTACCGTCGAT 88527 || |||||||| ||||| ||||| | ||| | ||||||| | || || || Sbjct 165 TCCGTGCAGATCGCCAACTACCCAAATATTTCGGTATTTGCTGCCATCAAT 115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328860929072554