Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ciconia_20boyciana_20[genbank_20GCA_5F002002965.1_202017-02-09] 505,419 sequences; 1,364,945,554 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq380048 116 9e-21 seq394259 107 5e-18 >seq380048 Length=211 Score = 116 bits (128), Expect = 9e-21 Identities = 121/157 (77%), Gaps = 4/157 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || ||||| || || |||||||| ||||| || || ||| Sbjct 57 CAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTTGA--GCCCAGTG 114 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || || || || |||| Sbjct 115 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGATCAGC 174 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 | | || ||||| || || || ||||| |||||||| Sbjct 175 AGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGG 211 >seq394259 Length=215 Score = 107 bits (118), Expect = 5e-18 Identities = 119/157 (76%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || ||||| || || || || || || |||||||| || || || || ||| Sbjct 155 CAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAAGTTGA--GCCCAGTG 98 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||||||||| ||||| |||||||| ||||| || || || || |||| Sbjct 97 ACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAGC 38 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 | | || |||||||| || || ||||| |||||||| Sbjct 37 AGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1195936220814286