Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colinus_20virginianus_20[genbank_20GCA_5F000599465.2_202017-07-13] 42,369 sequences; 1,254,146,751 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq33 114 9e-21 >seq33 Length=5235935 Score = 114 bits (126), Expect = 9e-21 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 |||||| |||| |||||||| || | |||||||||||| || || || || || | ||| Sbjct 587766 CATGTCTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGCCCCAAGTC 587825 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 || ||||| ||| | ||| ||| ||||||| || || | || ||||| || || Sbjct 587826 CCCCTCTTCTCTGGTGTAAAACCCCTGTTTATCCAGGAACTCACGTGACCCATTAGCATC 587885 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 ||| |||||||| ||||| | ||||||||||||| ||||| || || Sbjct 587886 CCAAATCTTTACACCCTTTGCAGAGAGCTCTTTGGCATTTGTAGAACC 587933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339961962403437