Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colinus_20virginianus_20[genbank_20GCA_5F000599465.2_202017-07-13] 42,369 sequences; 1,254,146,751 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 7e-13 >seq3 Length=10700457 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 ||||||||| || | ||| || ||||| |||||||| |||| || | |||||||| || Sbjct 7765925 ACCATAAGGCGATCTTGGGTAAAAAGGGGTGGTCTCCTTCTGCGGGATTTCTTGCACTTT 7765984 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 ||| |||||||||||||||| ||||| |||| Sbjct 7765985 TCCAAAAAGTTCACTGGTGGAGGCTTGGTAGA 7766016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665141945847080