Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colinus_20virginianus_20[genbank_20GCA_5F000599465.2_202017-07-13] 42,369 sequences; 1,254,146,751 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq139 358 9e-94 seq4212 327 1e-84 seq6222 179 5e-40 seq1 178 2e-39 seq38 163 4e-35 seq1287 140 4e-28 seq195 87.8 2e-12 seq440 84.2 3e-11 seq19 84.2 3e-11 >seq139 Length=2242343 Score = 358 bits (396), Expect = 9e-94 Identities = 1047/1596 (66%), Gaps = 35/1596 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || |||||| | || || || || || || || ||||| | || ||| Sbjct 1264049 GCCATCGGCATCGATCTGGGCACCACGTATTCTTGCGTGGGTGTCTTCCAGCATGGCAAA 1263990 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| | || ||||| |||||||| || || || || || || || || Sbjct 1263989 GTGGAGATCATCGCCAACGACCAGGGAAACCGCACCACGCCCAGCTATGTGGCTTTCACC 1263930 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| || || ||| |||| ||||| || || || ||| || |||||||| | ||| Sbjct 1263929 GATACGGAGCGCCTCATTGGGGATGCTGCCAAGAACCAGGTGGCGATGAACCCCACCAAC 1263870 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||||| || |||||||| || || ||||||| | || | || || Sbjct 1263869 ACCATCTTTGATGCCAAGCGTCTCATCGGCCGCAAGTATGATGACCCCACGGTGCAGTCG 1263810 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCG-GTGTGGCTGATAAGCCTATGATTAA 195597 || || ||| | ||| | | || || || | ||||| ||||| | | | | Sbjct 1263809 GACATGAAGCATTGGCCCTTCCGCGTAGTGAACGAGGGTGGC----AAGCCCAAGGTGCA 1263754 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 || || | | || |||| ||| || ||| || || || || |||||| | Sbjct 1263753 GGTGGAGTACAAGGGCGAGATGAAGACCTTCTTTCCAGAGGAGATCAGCTCCATGGTGCT 1263694 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 | ||||||||||||| || || ||| |||| || | ||| | | || ||| | Sbjct 1263693 TACCAAGATGAAGGAGATCGCTGAGGCTTATCTGGGGAAGAAGGTGCAGAACGCTGTTAT 1263634 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || || ||||||||||||| ||| || || || ||||| || || || |||| | || Sbjct 1263633 CACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACCAAAGATGCTGGCACCAT 1263574 Query 195778 TGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATG 195836 | || || || ||| | | || ||||| || || ||||| ||||| ||||| |||| Sbjct 1263573 CACTGGCCTTAA-TGTGATGCGTATCATCAACGAGCCCACAGCAGCTGCTATTGCCTATG 1263515 Query 195837 GTCTGGACAAGAA------CAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 | |||||||||| | || | ||| || ||||| | |||||||| | || | Sbjct 1263514 GCTTGGACAAGAAAGGCACCCGGGCTGGAGAGAAGAATGTGCTCATCTTTGACTTGGGAG 1263455 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 | || || |||||||| || | || | || || | ||| || || || || ||| ||| Sbjct 1263454 GGGGCACTTTTGATGTATCCATCCTTACCATCGAGGATGGCATCTTTGAGGTGAAGTCTA 1263395 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | ||||| || || || || ||||| || || || || ||| | | ||||| Sbjct 1263394 CGGCTGGGGACACCCACCTGGGTGGGGAGGACTTTGACAACCGTATGGTGAACCATTTTG 1263335 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 || |||||| || ||| | ||| || ||| |||| ||| | || | | | Sbjct 1263334 TGGAAGAGTTCAAGCGTAAGCACAAGCGTGACATTGCTGGCAATAAGCGAGCAGTGAGGC 1263275 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCT---CTCTTCTACGGCTCAAACAA 196127 |||| | || || || || | || ||||| ||||| |||||| || ||| | | Sbjct 1263274 GGCTGCGCACAGCTTGCGAGAGGGCGAAACGTACTCTGAGCTCTTCCACA---CAAGCCA 1263218 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||||||||| || | || || || ||||||||||| || |||| || ||||| | Sbjct 1263217 GCATTGAGATTGACTCCCTCTTCGAGGGCATTGACTTCTACACCTCTATCACTCGTGCCC 1263158 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTG-TATGGAACCTGTTGAACAAGTA 196246 | ||||| ||| | || |||| | ||| | || | |||| || || || | | Sbjct 1263157 GCTTTGAGGAGCTCAATGCTGACCT-TTTCCGTGGTACTCTGGAGCCAGTGGAGAAGGCC 1263099 Query 196247 CTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 || ||||| || ||| | || ||| || | | || || || |||||||| || || Sbjct 1263098 CTGCGTGATGCCAAGCTTGACAAGGGCCAGATCCAGGAGATCGTGCTTGTGGGGGGCTCC 1263039 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || ||||| || ||||| || || |||| |||||||||| ||||| | ||| Sbjct 1263038 ACTCGTATCCCTAAGATCCAGAAGTTGCTACAGGACTTCTTCAATGGCAAAGAGCTCAAC 1262979 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 || | |||||||| ||||| || ||||||||||| || || || || || ||||| || Sbjct 1262978 AAGAGCATCAACCCAGATGAGGCTGTTGCTTATGGCGCTGCGGTGCAAGCGGCTATCCT- 1262920 Query 196427 TCAGGTGTTGACAA---TAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTA 196483 | | | ||||| | ||||| |||||||| || || | ||||| | || | Sbjct 1262919 TATG--GGAGACAAGTCCGAGAACGTGCAAGATCTGCTCCTGTTGGATGTCACCCCTCTG 1262862 Query 196484 TCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACT 196543 |||||||| |||| || || || ||||| ||||| | || | | ||||| || Sbjct 1262861 TCCCTGGGCATTGAGACGGCAGGCGGTGTGATGACAGCTCTCATCAAGCGTAACACCACG 1262802 Query 196544 ATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCA-ACCAGGTGTTCA 196602 ||||| || || | || ||| | || || || || || || | || | || | Sbjct 1262801 ATTCCCACCAAACAAACGCAGACCTTCACCACCTACTCGGACAACCAGAGCA-GCGTCCT 1262743 Query 196603 TATTCAAGTATATGAAG--GAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAAC 196659 | || || ||||||| |||| ||| || | ||||| ||| | | || || | Sbjct 1262742 CGTCCAGGTGTATGAAGGTGAGAGGGCT---ATGACGAAGGACAACAACTTGCTGGGCAA 1262686 Query 196660 TTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTT 196719 || || | ||||| || || | |||||| | || || || |||||| | || || Sbjct 1262685 GTTTGACCTAACGGGCATCCCCCCAGCACCCCGTGGGGTCCCTCAGATTGAGGTCACTTT 1262626 Query 196720 CGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATC 196779 || ||||| || ||||| || || || |||| |||| ||||||| | || || Sbjct 1262625 TGACATAGATGCGAATGGTATCCTGAATGTCAGCGCTGTGGACAAGAGCACAGGGAAGGA 1262566 Query 196780 TGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTAT 196839 | ||||| || ||||| |||||||| || ||| || || || ||||| ||||| Sbjct 1262565 GAACAAGATAACCATCACCAACGACAAGGGTCGCCTTAGCAAAGATGACATTGATCGTAT 1262506 Query 196840 GGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGA 196875 ||| ||||| || || || |||| | || ||||| Sbjct 1262505 GGTGCAAGAAGCAGAGAAATACAAAGCGGAGGACGA 1262470 >seq4212 Length=22462 Score = 327 bits (362), Expect = 1e-84 Identities = 1032/1585 (65%), Gaps = 13/1585 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||| | ||||| || | || || || ||||| || |||||||| ||| ||||||| Sbjct 18871 GCTGTGGGTATTGACCTGGGGACCACGTACTCGTGCGTTGGTGTGTGGAAAAATGACACG 18930 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || |||| ||||| || || || || || || |||||||| || || || Sbjct 18931 GTGGAAATCATAGCGAACGACCAGGGCAATCGCACGACGCCCTCGTACGTGGCGTTCACG 18990 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | ||||| || || || |||||||| ||||| || ||| ||||| ||| Sbjct 18991 GACACGGAACGACTTGTCGGGGATGCCGCGAAAAACCAAGTAGCACGCAACCCAGAAAAT 19050 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || | || || ||||| || | || || |||||||| || | || || Sbjct 19051 ACAATTTTCGATGCGAAACGCTTGATCGGCCGCAAGTTCGATGACCCGTCGGTGCAGTCT 19110 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || || ||||| | | |||| | | || | ||| || || ||||| | Sbjct 19111 GACATGAAACACTGGCCGTTCAAAGTAATCGCTGGCAAAGGTGACAAACCGCTGATTGAA 19170 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || | | || || |||| ||| || || || || |||||| | |||||| || Sbjct 19171 GTGCATTACCAAGGAGAGACGAAGTGCTTCCACCCTGAGGAGATTTCGGCGATGGTGCTG 19230 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 ||||||||||| | ||||||| | | | || | |||||||| || || | Sbjct 19231 GGCAAGATGAAGGATATCTCGGAATCGTACCTTGGCCGCCCAGTGAAAGAAGCGGTGATC 19290 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||| | ||||||||| || ||||| || || ||||| | | ||| Sbjct 19291 ACGGTGCCGGCATACTTTAATGATTCACAGCGCCAGGCCACTAAAGACGCGGGAACGATT 19350 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || ||| | ||| ||| | || ||||| |||||||| || ||||||||||| |||||| Sbjct 19351 GCAGGTTTGAACGTCCTTCGCATCATCAACGAACCAACTGCAGCTGCAATTGCATATGGT 19410 Query 195839 CTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACG 195898 ||||||||| | || ||| | ||||| ||||| || || | |||||||| || Sbjct 19411 CTGGACAAGCGCGGCTGCGGAGAAATGAATGTGTTGATTTTCGACATGGGTGGTGGCACC 19470 Query 195899 TTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGT 195958 || ||||| || || | | |||||||| |||||| || || ||| || || || || Sbjct 19471 TTCGATGTTTCTCTGTTGACTATTGAAGATGGTATTTTTGAGGTACGTGCAACGGCCGGC 19530 Query 195959 GATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-ATGA 196017 ||||| || | || || || || ||||| || || | | | || || | || Sbjct 19531 GATACCCACTTGGGGGGCGAGGACTTCGACAATCGCCTGGT-GGATTTCTGCGTGCAGGA 19589 Query 196018 GTTCCGTCGAAAGAATA-AG--AAAGATAT-TTCTGGAA-ATCCTAGGGCTCTTCGTCGG 196072 ||| ||||||| | || || || || | ||| | || | ||||| || || Sbjct 19590 CTTCAAGAGAAAGAACAGAGGCAAGGACATCAGCACGAACAGCC--GAGCTCTACGCCGT 19647 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 || |||| || ||||| || ||||| ||||| || | | || ||| | Sbjct 19648 CTCCGGACCCAGTGCGAACGCGCGAAACGCACTCTTTCCAGCAGCACGCAGGCAACCATC 19707 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTT 196192 || || || || |||| || || || |||| || | || | || || |||||| Sbjct 19708 GAAATCGACTCTTTGTACGAAGGCATCGACTACTCAGTGTCCATCTCGCGCGCGCGTTTT 19767 Query 196193 GAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGT 196252 ||||| | | || | || | | | |||| || || ||| | || | Sbjct 19768 GAAGAACTTTGCATGGACTACTTCCGTCACTCACTGGACCCGGTCGAAAAGGTGTTGAAA 19827 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 || || || || ||| | || ||| |||| || || || ||||||||| | Sbjct 19828 GATTCAGGCATTGACAAGCGTTCAGTAAGCGAAGTTGTACTCGTAGGTGGATCAACCAGA 19887 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 ||||||||||| || ||| | | | |||||||| |||||| | | || Sbjct 19888 ATTCCGAAGATCCAGCAGTTCATCACCGAATTCTTCAACGGTAAAGAACCATGCCGGTCG 19947 Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGT 196432 || ||||| |||||||| || || || ||||| || || || ||||||||| | | ||| Sbjct 19948 ATTAACCCTGATGAAGCTGTCGCGTACGGTGCTGCGGTGCAAGCTGCTATTAT-TAAGGG 20006 Query 196433 GTTGAC-AATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGGG 196491 | | || | | | || || | || || || | ||||| || || | || || || Sbjct 20007 GGTCACGAGCTCTCAGGTACAGCAGCTGCTCCTCTTGGATGTGGCGCCACTTTCACTCGG 20066 Query 196492 TCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGAC 196551 || ||||| || ||||| || ||||| | | ||| | || ||||| ||||| || Sbjct 20067 GCTAGAAACTGCCGGTGGCGTGATGACGACGCTGATTCCGCGAAATACAACGATTCCTAC 20126 Query 196552 TAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAGT 196611 ||| ||| ||| ||| | ||||| ||||||| || || ||||| | |||||||| Sbjct 20127 TAAAAAGTCCCAAACGTTTACGACGTACGCCGATAACCAGCCTGGTGTGCTCATTCAAGT 20186 Query 196612 ATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670 | ||||| ||||| || || | ||||| ||| |||| || || | ||| || || Sbjct 20187 CTTCGAAGGTGAACG-ACCGATGACGAAGGACAACAATCTTCTCGGTAAATTCCATCTGG 20245 Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 || || || | || ||| | || |||||||| || | ||| || ||| | |||| Sbjct 20246 ATGGAATCCCTCCGGCGCCCCGGGGAGTTCCACAAATCGAAGTTACGTTTGATTTGGACG 20305 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 |||| || || | | ||| ||||| ||||||||| | | || || | ||||| Sbjct 20306 CAAACGGCATCATGAGCGTGACAGCGGAGGACAAGTCCACCGGGAAGAGCAACCAGATTA 20365 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 ||| |||||||| || || | || | || || || | || ||||| || || | Sbjct 20366 CGATCACCAATGAGAAAGGAAGACTCAGCCAAGACGAGATCAACCGCATGGTGCAGGAAG 20425 Query 196851 CGGAAAAGTACAGGGAAGAAGACGA 196875 | || || |||| || ||||| || Sbjct 20426 CAGAGAAATACAAGGCTGAAGATGA 20450 >seq6222 Length=16261 Score = 179 bits (198), Expect = 5e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || ||||| |||||||| ||| | Sbjct 567 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACGCTCGAGGTCGAGCCCAGT 626 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 627 GACACCATTGAAAACGTAAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 686 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 687 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 746 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 747 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 778 Score = 179 bits (198), Expect = 5e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||||||||| ||||| || || |||||||| || |||||| | Sbjct 1023 ATGCAGATCTTTGTGAAAACCCTGACTGGCAAGACCATCACCCTTGAAGTTGAGCCCAGT 1082 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 1083 GACACCATTGAAAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 1142 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || || || | || |||||| Sbjct 1143 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACGCTGTCCGACTACAAC 1202 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 1203 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 1234 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||||||||| ||||| ||||| || || |||||||| ||||| ||| | Sbjct 339 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCTAGC 398 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || |||||||| ||||| || ||||||||||| ||||||||| Sbjct 399 GACACCATAGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCCGATCAG 458 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || || ||||| || ||||| ||||| || || ||||| |||| |||||| Sbjct 459 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCTGACTACAAC 518 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || || || || || ||||| || || Sbjct 519 ATCCAGAAAGAATCCACCCTGCACCTGGTGCT 550 Score = 149 bits (164), Expect = 8e-31 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||||||| | ||||| || || ||||| || ||||| ||| | Sbjct 795 ATGCAGATCTTCGTGAAAACCTTGACTGGCAAGACAATCACTCTTGAGGTCGAGCCCAGT 854 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || || | || ||||| || ||||| || ||||||||||| || |||||| Sbjct 855 GACACCATAGAGAATGTGAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAG 914 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 915 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACCCTGTCCGACTACAAC 974 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || || || || || || ||||| || || Sbjct 975 ATCCAGAAAGAATCCACCCTGCACCTGGTGCT 1006 >seq1 Length=14292544 Score = 178 bits (196), Expect = 2e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| ||||| || || |||||| | ||||| ||| | Sbjct 9556179 ATGCAGATCTTCGTGAAGACCCTCACTGGTAAGACCATCACCTTGGAGGTGGAGCCCAGT 9556120 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || ||||||||||| || ||||||||| Sbjct 9556119 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCCGATCAG 9556060 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||| ||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 9556059 CAGAGGCTGATTTTCGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 9556000 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || || || || || | || |||||||| Sbjct 9555999 ATCCAGAAGGAGTCCACCCTGCATCTCGTCCTGCGCCTGAGGGGTGGT 9555952 Score = 170 bits (188), Expect = 3e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||||| || || || || |||||| | ||||| ||| | Sbjct 9556635 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCTTGGAGGTCGAGCCCAGC 9556576 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| |||||||| || || ||||||||||| || ||||||||| Sbjct 9556575 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCCGATCAG 9556516 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || || |||||||| || ||||| ||||||||||| ||||| | || |||||| Sbjct 9556515 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACCCTGTCCGACTACAAC 9556456 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || || || || || Sbjct 9556455 ATCCAGAAGGAGTCCACCCTGCATCTCGTCCT 9556424 Score = 161 bits (178), Expect = 1e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| ||| | || || || || ||||| || ||||| ||| | Sbjct 9556407 ATGCAGATCTTCGTGAAGACCTTGACAGGTAAGACCATCACTCTGGAGGTCGAGCCCAGT 9556348 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || ||| |||| |||||||| || || ||||||||||| || || |||||| Sbjct 9556347 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCCCCGGATCAG 9556288 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || | || ||||||||||| || ||||| |||||||| || ||||| | || |||||| Sbjct 9556287 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 9556228 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073 | || |||||||| || || ||||| || || Sbjct 9556227 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCT 9556196 >seq38 Length=5113197 Score = 163 bits (180), Expect = 4e-35 Identities = 354/530 (67%), Gaps = 0/530 (0%) Strand=Plus/Plus Query 195875 ATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATA 195934 || ||||| ||||| ||||| || |||||||| || |||| | ||||||| || || Sbjct 2806286 ATATTTGACCTCGGAGGTGGCACCTTTGATGTGTCGATTCTGACGATTGAAGACGGCATC 2806345 Query 195935 TTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGT 195994 || || || || | || || ||||| |||||| | ||||| |||||||| || || Sbjct 2806346 TTTGAGGTGAAATCCACCGCGGGTGACACTCATTTGGGTGGAGAAGATTTTGACAACCGC 2806405 Query 195995 CTTCTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAAT 196054 | || || || | |||||| || ||| | ||||| || || || || Sbjct 2806406 ATGGTCAACCACTTCATCGCCGAGTTCAAGCGCAAGCACAAGAAGGACATCAGTGAGAAC 2806465 Query 196055 CCTAGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCT 196114 || || ||||||| ||| | ||||| || || ||||| || || || || || || Sbjct 2806466 AAGAGAGCAGTTCGTCGCCTTCGTACTGCGTGCGAGCGTGCGAAGCGTACCCTGTCATCC 2806525 Query 196115 ACGGCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACT 196174 | ||||| | | |||| || ||||| | | ||| || ||||||||||| || | Sbjct 2806526 AGCACTCAAGCCAGTATTGAAATCGATTCTCTCTATGAGGGCATTGACTTCTACACGTCG 2806585 Query 196175 ATTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCT 196234 || ||| | || || || || ||| | ||| | || |||| | |||| ||| Sbjct 2806586 ATCACCAGAGCTCGCTTCGAGGAGCTGAACGCCGACCTGTTCCGTGGCACCCTGGATCCT 2806645 Query 196235 GTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTT 196294 || || | | || || || || ||| |||| ||||| || | | || || || || Sbjct 2806646 GTGGAGAAGGCCCTGCGGGATGCCAAGCTGGACAAGTCACAGATCCACGACATCGTGCTG 2806705 Query 196295 GTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAAT 196354 || || || || ||||| || || ||||| || || |||| |||||||||| Sbjct 2806706 GTTGGGGGGTCTACCCGCATCCCCAAGATCCAGAAGCTGCTGCAGGACTTCTTCAATGGC 2806765 Query 196355 AAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGC 196404 || || || ||||| | ||||| || |||||||| || ||||| ||||| Sbjct 2806766 AAGGAGTTGAACAAGAGCATCAATCCTGATGAAGCTGTAGCTTACGGTGC 2806815 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/143 (76%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 195708 ATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACG 195767 |||| || || |||||||| || || || | || || || || ||||| ||||| || | Sbjct 2806038 ATGCTGTAGTCACTGTACCAGCCTATTTTAACGACTCCCAGCGGCAGGCCACAAAAGATG 2806097 Query 195768 CTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCA 195826 ||| | ||||| || || || ||| || | |||||||| || || ||||| ||||| Sbjct 2806098 CTGGAACCATTGCAGGGCTCAA-TGTGCTGCGGATTATCAACGAGCCGACAGCTGCTGCT 2806156 Query 195827 ATTGCTTATGGTCTGGACAAGAA 195849 || || ||||||||||||||||| Sbjct 2806157 ATAGCCTATGGTCTGGACAAGAA 2806179 >seq1287 Length=55868 Score = 140 bits (154), Expect = 4e-28 Identities = 172/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || ||||| || | || || || || || || | ||||| || ||||| Sbjct 31600 ATGCAAATTTTCGTGAAGACTTTGACAGGGAAGACGATAACGTTGGAGGTGGAACCGTCA 31541 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || | || || || ||||| || |||||||||||||| || || ||| Sbjct 31540 GACACGATCGAGAATGTGAAGGCGAAAATTCAGGACAAGGAAGGCATTCCGCCAGACCAG 31481 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| |||||||| || || || ||||| |||||||| | || || | || ||||| Sbjct 31480 CAACGGCTTATTTTCGCGGGGAAGCAGCTGGAAGATGGCAGAACACTATCGGACTACAAT 31421 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG--TGCAA 172093 |||| ||||| || ||| | || || || || || | || || || ||||| Sbjct 31420 ATTCAGAAGGAATCAACTTTGCATCTGGTGCTGCGGTTGCGTGGAGGAATGCAA 31367 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || ||||| || | || || || ||||| || || ||||| ||| | || Sbjct 31144 ATGCAAATTTTCGTGAAGACTTTAACCGGCAAGACTATTACTCTGGAGGTAGAGCCATCT 31085 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || || || || | || || || |||||||||||||||||||| || || || || Sbjct 31084 GATACGATAGAAAATGTGAAGGCGAAAATTCAAGATAAGGAAGGCATCCCTCCTGACCAA 31025 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | |||||||| || ||||| || || || ||| | || || | || || ||| Sbjct 31024 CAGCGATTGATTTTTGCGGGAAAACAACTCGAGGACGGAAGAACGCTATCCGACTATAAC 30965 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||||||||| || ||||| || | || | || || || |||||| Sbjct 30964 ATTCAAAAGGAATCAACTCTCCATTTGGTGTTGAGACTACGTGGTGGT 30917 >seq195 Length=1492744 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 196637 AAGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGT 196696 ||||| || ||||| || |||||||| ||| |||| || || || |||| || | ||| Sbjct 1471124 AAGGACAATCATCTTCTGGGAACTTTTGATCTGACTGGAATCCCTCCTGCTCCTCGTGGT 1471183 Query 196697 GTTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCT 196756 || ||||||||| | || ||| || ||||| | ||||| || || ||||||||| Sbjct 1471184 GTCCCACAGATTGAAGTGACCTTTGAAATAGATGTGAATGGGATCCTCCGTGTCACAGCT 1471243 Query 196757 GAGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTT 196816 || ||||| | |||| || | ||||| ||||| || || || ||||| Sbjct 1471244 GAAGACAAAGGCACTGGGAACAAAAACAAGATCACAATTACAAACGATCAGAATCGGCTA 1471303 Query 196817 TCTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGT 196859 | ||||| || || | |||||| | ||||| || |||| Sbjct 1471304 ACGCCTGAGGAGATCGAGAGGATGGTTAACGATGCTGAGAAGT 1471346 >seq440 Length=257732 Score = 84.2 bits (92), Expect = 3e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 ||||| ||||| | || || || ||||| || || || | | | | | || || Sbjct 208230 ATTGGCATCGACCTGGGTACCACGTACTCTTGCGTCGGGATCTATCGTCACGGGCGCGTC 208289 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || ||||| | ||||||||||| ||||| | ||||| ||||||||||| ||||| ||| Sbjct 208290 GATATTATTGCAAATGACCAAGGGAACCGAATCACTCCCTCGTACGTTGCGTTTACCGAT 208349 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | ||||| ||||| || || || || || | | | || || || || || Sbjct 208350 GAAGAACGGAAAGTTGGTGAAGCTGCGAAGAACGAAGCCACAATCAATCCGGCGAACACA 208409 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCG 195510 |||| |||| |||||||| |||||||| Sbjct 208410 CTCTTCGACGTTAAGCGTCTCATTGGTCG 208438 >seq19 Length=6418026 Score = 84.2 bits (92), Expect = 3e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 ||||| || |||||||| ||||||| ||||||||||| | ||||||| | || || Sbjct 2538956 AACATAAAGGCCAAGATCTAAGATAAAGAAGGCATTCCTACTAATCAGCAGAGGCTGATC 2538897 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGA 172034 |||| |||||| ||||| |||||||| | ||||| |||| Sbjct 2538896 TTTGTTGGTAAGCAGCTGGAAGATGGGTGCACCCTGTCTGA 2538856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657513987849680