Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colinus_20virginianus_20[genbank_20GCA_5F000599465.2_202017-07-13] 42,369 sequences; 1,254,146,751 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq4348 89.7 5e-13 >seq4348 Length=21967 Score = 89.7 bits (98), Expect = 5e-13 Identities = 124/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||| ||||| || | || |||||| | ||| | ||||| |||| ||| | |||| Sbjct 9784 AGCATATGGGGACCAACATGTGATGGCCTCGATCGGATTGTGGAGCGCTGTAACATGCCG 9725 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||||| ||||| || |||||| | | |||||||||||||| || |||| || |||| Sbjct 9724 GAGCTGCAAGTTGGTGACTGGATGCTGTTTGAAAACATGGGTGCCTACA-CTGTCGCAGC 9666 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTC 21294 |||| || || ||||| |||| | |||| || || ||||| || || Sbjct 9665 AGCTTCTACTTTCAACGGATTCCAGAGGCCAACAATACATTATGTGATGTC 9615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463300100455920