Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colinus_20virginianus_20[genbank_20GCA_5F000599465.2_202017-07-13] 42,369 sequences; 1,254,146,751 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq236 87.8 2e-12 >seq236 Length=1091096 Score = 87.8 bits (96), Expect = 2e-12 Identities = 101/135 (75%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 32826 GGACAGGCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTAT 32885 |||||| | ||||||||||| ||||| ||| | ||||| |||||||| ||||| | ||| Sbjct 79570 GGACAG-CTTTTTTTGGAGCCCAGATGAATGCGTTTATTCATGTTATTATGTACATGTAT 79628 Query 32886 TACGGATTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTA 32945 ||||||||| | || || ||| | | ||||| || ||||||||| ||| || Sbjct 79629 TACGGATTAGCTGCCTGTGGCCCTAAAGTTCAGAAATACCTGTGGTGGAAACGATACTTG 79688 Query 32946 ACTATCATACAATTG 32960 ||||| | |||||| Sbjct 79689 ACTATATTGCAATTG 79703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602861347908560