Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq38595 145 9e-30 >seq38595 Length=3692 Score = 145 bits (160), Expect = 9e-30 Identities = 200/280 (71%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | ||||||||| |||||||||| | |||||||||||| Sbjct 283 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCAAAGTTCCAGGAGATGTCGTTGCGGCA 224 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 ||| || |||||| ||| |||||||| | ||| |||| | ||||||| ||| Sbjct 223 CACGGGGGACCAGATGATGTACTGGGGGTTGGTCATCAGCGAGGAGGGGTCGTCGTGAGG 164 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACCTC 83298 ||||| |||||| ||||||| |||||| || || || | ||||| ||||| Sbjct 163 GTAGGGCAGAGCCTCTTTCAGGAAGGTGAAGAGAGGGTGCGCGTTCTTCCCGTTCACCTC 104 Query 83299 GCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTCAG 83358 ||||||||| || | || || || |||| | | || || || ||||| || | || ||| Sbjct 103 GCACTTCTCAAACACGATGAAATTGGGCTTGTACCCCTTGCCGGGACGAACATACTCCAG 44 Query 83359 GGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 ||| ||| ||||||| | || | ||||||||| || Sbjct 43 CGAAAGCAGGATCTCGTCGTTGGTAGTATTTTCCTGGGGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608262672127520