Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq25250 98.7 9e-16 >seq25250 Length=4203 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || ||||| |||||||| || || || || || || || ||||| ||| Sbjct 3144 GTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTACGTCCGTCTTCCAGTTGTTTGCCA 3203 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| || | ||||||||| || || |||||||||||||| || || || Sbjct 3204 GCGAAGATCAGCCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 3263 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| || || |||||| || | ||| | || ||||| ||||| || Sbjct 3264 ACATTCTCAATGGTATCACTGGGCTCGACTTCCAAGGTGATGGTCTTGCCAGTCAGGGTC 3323 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 3324 TTCACAAAGATCTGCAT 3340 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| || ||||| |||||||| || || ||||| || || || ||||| ||| Sbjct 3600 GTAGATTCCTTTTGGATGTTGTAGTCAGACAGGGTGCGTCCGTCTTCCAGTTGTTTGCCA 3659 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| || | ||||||||| || || |||||||||||||| || || || Sbjct 3660 GCAAAGATCAGCCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTG 3719 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | ||| || || |||||| || | ||| | || ||||| ||||| || Sbjct 3720 ACGTTCTCAATGGTATCACTGGGCTCGACTTCCAAGGTGATGGTCTTGCCAGTCAGGGTC 3779 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 3780 TTCACAAAGATCTGCAT 3796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433459294426096