Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq14414 122 7e-23 >seq14414 Length=70000 Score = 122 bits (134), Expect = 7e-23 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 |||||||||||||| || ||| || ||||| || || ||| ||| ||||||||| Sbjct 69005 ATGGCTTTGCCTCCGTGCCATGCCCTTTGCCAGTTCTATGTTCTAAATGGTGAATTGTCT 68946 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || ||| | ||||| | || | ||||||||||| || || |||||||||||||| || Sbjct 68945 TGCCAACTCTATCAGAGGTCTGGAGATATGGGACTTGGAGTGCCTTTCAATATTGCCAGC 68886 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAG 20557 ||| | ||||| || || |||||||| ||||| |||| Sbjct 68885 TATTCACTGCTCACATACATGATTGCCCATGTCACAG 68849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398842531519660