Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq35893 87.8 4e-12 >seq35893 Length=2034 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGC-T 248951 ||||||||| | ||| | ||| |||| ||||| ||||||| ||||| ||| ||| | | Sbjct 1680 CAGCACATGCTCATGAGGGTGTCTGTGGGGATCCACAAGGGCGACATCGAG-GCGGCCAT 1738 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||||||||||| | || || |||||| | || || ||| | || ||||||||||| Sbjct 1739 CGAGACGTACAACCTGCTGTCGGAGCGCTGGTTCACTCACGCCTCGCCCACGCTCTTCAA 1798 Query 249012 CGCCGGTACC 249021 |||||| ||| Sbjct 1799 CGCCGGCACC 1808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1072800779325184