Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq51162 109 5e-19 >seq51162 Length=873 Score = 109 bits (120), Expect = 5e-19 Identities = 102/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 145668 TGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGAT 145727 |||| | |||||||| | ||||| ||||| ||||||||||| ||||| || ||||| | Sbjct 530 TGTACTCCACGATCTCCGTGCACAGGTTGCTGCATTTGATGGTCCCCAGGTTCTGCTGGT 471 Query 145728 TACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCG 145787 | || ||||||||||| | ||| |||||||||||||| || ||||||||| ||| | Sbjct 470 TGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGGGTGCCAGTCTCGGTCTGGG 411 Query 145788 TCTCCACGAT 145797 ||| | ||| Sbjct 410 ACTCGATGAT 401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471598679569920