Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colius_20striatus_20[refseq_20GCF_5F000690715.1_202014-05-13] 70,188 sequences; 1,075,931,597 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq20714 89.7 3e-12 >seq20714 Length=3824 Score = 89.7 bits (98), Expect = 3e-12 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 |||||||| || ||| || || | ||| | || ||| || || |||||||||||| Sbjct 2232 ACTAAAGACAACAACTTGCTGGGCAAGTTTGAGCTGACAGGGATCCCCCCTGCTCCCAGA 2291 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || || ||||| |||||||| || |||||||||||||| || || || || || || || Sbjct 2292 GGTGTACCTCAGATTGAAGTAACCTTTGATATTGATGCCAACGGCATCCTGAACGTGTCT 2351 Query 476171 GCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAAA 476217 ||| ||||| | | |||| || || || || |||||||| Sbjct 2352 GCTGTGGATAAGAGCACTGGCAAGGAGAACAAGATCACAATTACAAA 2398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3265168496127824